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Mutant Lines
GT13498

GT13498

CSHL Arabidopsis genetrap mutant lines

Original: GT13498

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13498

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 1078688 [Map]; Strand: w
- AT3G04110.1 - [+] show detail - glutamate receptor 1.1
  Distance: 0; Region: exon2 (CDS)

CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCTATCCTTC 
TCTGTTCATC TCACTCGACA ATNACGATTT CAAATGTCTC TGAGATAAAT 
TTGTTGTCAG AGATATGGAT GTCACCACTC AAACCCTTGA ATCTACTATG 
TCTAATTGTA TCCAGAAGAT CAGCTGATAC ATTCGAAGAT GCTTCAACTT 
TACCACTTAC ACTGAACTTC TCTACTGCAT TTGCTAGAAT ACAAGCGATA 
TCGTGTGCGC GTAAACCGAT GATTACACTA GAATGCTCTG TTTCTGTATC 
ATCTCCCATA CGTTTCCTCA ATCTTGAAGT AAAATTCTTA ACTTCTTCAG 
ATACAGGGAT GTAAGATTTG AAACCAATGA CCCCTTGCAT CGACCTAGTT 
ATTGCAAAAT GTTCCAAGTA GTTCATGGTT CTTGCAGTGA GGATCCAAGC 
GAACGCTTCT TCCATCAAAC CTAACTTCTC TACACATTGG AAGAGACGAG 
AAACAAGAAT CTCGGACATA TGCACCCACA AAAACCGATG CTCTTGAGAC 
CTTAAGCT

3 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: GT13498 - 3-prime edge
```
AGAGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCTAT CCTTCTCTGT 
TCATTCTCAC TCGA
```

5 prime edge [+] show sequence

Chromosome: 3; Position: 1078775 [Map]; Strand: w
- AT3G04110.1 - [+] show detail - glutamate receptor 1.1
  Distance: 0; Region: exon2 (CDS)

ATGGAGTGGT GGTAGTTTTA GCCAAAGAAG ACAGATTGTT TGGCCTGGCA 
GGTCTCGTAA GATCCCAAGA CACCGTGTTT TGGCAGAGAA AGGTGAAAAG 
AAGGTGCTTA GGGTCTTAGT TACCGCAGGA AACAAGGTCC CGCATCTAGT 
GTCGGTGCGT CCTGATCCTG AAACAGGTGT TAATACTGTC TCTGGATTCT 
GCGTAGAGGT TTTCAAGACT TGCATTGCTC CTTTTAACTA CGAGCTTGAA 
TTCATACCTT ACCGTGGAAA CAATGACAAT CTTGCTTATC TACTTTCTAC 
TCAGGTGTGA AAATGCAAAC AGTTTAAAAG CATTTTTCTA GTCAAAAATG 
ATTATGTATG TTTCTAATAA TGTGTGTTTG CAATTTTGAC AGAGAGACAA 
GTATGATGCA GCAGTTGGTG ATATCACCAT CACTTCCAAC AGATCTTTGT 
ATGTTGATTT TACTTTGCCG TACACTGACA TTGGTATTGG AATCCTGACA 
GTAAAAAAGA AAAGCCAAGG GATGTGGACT TTCTTTGATC CTTTTGAAAA 
ATCCTTGTGG CTAGCGAGTG GAGCTTTCTT CGTCTTGACC GGGATTGTTG 
TTTGGTTGGT TGAACGGTCC GTTAATCCGG AGTTTCAAGG CTCTTGGGGA 
CAACAACTTA GTATGATGCT CTGGTTTGGA TTCTCCACCA TTGTGTTTGC 
T

AT3G04110.1

Model type: Protein coding
Short Description: glutamate receptor 1.1
Curator Summary: putative glutamate receptor (GLR1.1). Contains a functional cation - permeable pore domain. Involved in cellular cation homeostasis.
Computational Description: glutamate receptor 1.1 (GLR1.1); FUNCTIONS IN: intracellular ligand-gated ion channel activity, cation channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus, cellular cation homeostasis; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 1.3 (TAIR:AT5G48410.1); Has 3355 Blast hits to 3282 proteins in 359 species: Archae - 20; Bacteria - 507; Metazoa - 2116; Fungi - 0; Plants - 613; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink).
Link: InterPro Scan - TAIR