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GT13629

CSHL Arabidopsis genetrap mutant lines

Original: GT13629

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13629

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26449786 [Map]; Strand: c
      • AT5G66180.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: intron4 (CDS)
      • AT5G66180.2 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: intron4 (CDS)
      • AT5G66180.3 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: GT13629 - 3-prime edge
    GTAGAGGATT TTACCGACCG TTACCTTCCG TTTTCATCCC TACTTTAAGC 
    TTTTTCTCAC TTTGCTGATG AGCTCATTTG ATATGCTAAT ATTCAGGTGA
    GTCATGTGTG GACGATCATG AAGACACATT CAAGCAGTGG ACCTCCCGTA
    GACCTTACAA AGAAAGGAAA CAAGAAGCTA AGGCAAGGAA GAATTCTGTT
    TTGCCGCAGA ATGGACAGGC AGAAATTATT TTCTACGGAC AGGGTTCTGG
    AGTAATCGGG CTAAAAAAGA ATGAACTTTA TAGATCCCTT GACCAAAATG
    ATTATGCATC TTATGGGTAT GATAAGGTAT AGTTGTGATC CGCGGATGCA
    GCTACAGTCA CTTAAAAGTG ACATAACTAA AGATTTGAAG TGGAAATCTG
    CAGGTTCTTG TGGACGCAGA GTGCACACAC GATGGTTCGA TCAAACATAT
    CCAGAAATTT GAGCAATGGG GTTGGGAAAA CTCTGGAACG CCGTGTTCTG
    GATGCTGAGA GAACCGATAC AAACTTAAAA GCTCTTCAGG TACATTCCAT
    AAGTCTGTTG GTGTTTCGTG TGTCTACCCT TGTTATTGCC TCTCTGGTGA
    TCATTGCCAG GGCCTTTGTT TGCAGTTGAA TCTACTGAGA AATGGATTCA
    GATTGTTGAA AGAAGCTGGC ACTCTAGTGT ACAGCACCTG CAGGTGAAAA
    GTCCAATCAC AATAAGCTCT CTGTGCTCTT GC

AT5G66180.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); Has 8827 Blast hits to 7075 proteins in 2181 species: Archae - 455; Bacteria - 6424; Metazoa - 542; Fungi - 251; Plants - 202; Viruses - 0; Other Eukaryotes - 953 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66180.2

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); Has 2637 Blast hits to 2540 proteins in 1031 species: Archae - 209; Bacteria - 1812; Metazoa - 180; Fungi - 59; Plants - 92; Viruses - 0; Other Eukaryotes - 285 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66180.3

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); Has 8458 Blast hits to 6982 proteins in 2152 species: Archae - 444; Bacteria - 6084; Metazoa - 538; Fungi - 249; Plants - 190; Viruses - 0; Other Eukaryotes - 953 (source: NCBI BLink).
Link
InterPro Scan - TAIR