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GT13725

CSHL Arabidopsis genetrap mutant lines

Original: GT13725

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13725

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 3899128 [Map]; Strand: c
      • AT4G06676.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Etoposide-induced 2.4 (InterPro:IPR009890); Has 2...
        Distance: 0; Region: intron1 (CDS)
      • AT4G06676.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT13725 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAATGATAA 
    CTGACAAACT TAAATTTCAA TTTGGTTTTG ATTTGGTGAT AGGTCGAGAA 
    AGCTTCTCTT AAGAACTGGG CAGTGTTTTC TTTTGAATGG TTTGATTTTC 
    TTAGGAAGGT AAAAATCTCA TCTTTATGGT CTCTTTACTT TGACTTTGCT 
    TTGTTTGAAG AAAACGAATA CTTTATGATT GTTTATGATT CAGAATTAGG 
    TTAATTTGCA ATTTTGTCAA ATTTTCTAAA GAAAGTTTGA GACTTGATTA 
    AAGCAGAGAG CTTGTTATGA GTAGAATTCG CCCAATTCAG TACTTTTAGG 
    TCGAGATAGC TTCTATTACG AACAAACTAG TGTTTTCTTT TGAATGGTTT 
    GATTTTACTT AGGAGGTAAA AGTCTCATTT TTATGGTCTA TTTTGCATTT 
    GTTTTGATTG CTTGAGTGCA TACAAGTGAC CCGAAGACTC TCTGATGACT 
    GATGATCCAG AGAATAAGTA TTGATTTTGG GATGAGTTTT ATAATTAAAG 
    AAGAGAGATT TGTGTGAATA GATTCTCTCA ACTCAATACT TTTAGCTTAC 
    TTTTGGTTTT TATTTTGA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 3899075 [Map]; Strand: c
      • AT4G06676.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Etoposide-induced 2.4 (InterPro:IPR009890); Has 2...
        Distance: 0; Region: exon1 (CDS)
      • AT4G06676.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT13725 - 5-prime edge 
    TTCCATCCAC TTTATCCCTG GTTATCATTA GGAAACGAAT CAGTTTGAGA 
    GAGGAACCTG AGACAGAGAA TGACTACTCG GTCGAAGAGA ACAAGCTTCT 
    CGAAAACCCT CAAGCCATAG TAGCAACACC TGCTTCGATT TTGATCTCAT 
    CTGGTCAAAT CAAAGGGTTC GCGGTTTCGA TTGTTGACAA CGGAAGAGAT 
    TGAGAGAAGA AGACGTTGAA TCAGACAAGC AACAATAAAT TAGGTTTTTG 
    TTAGAAGGTG GTTTAATCAT GTTTTAGGAA AACAACATGA TTTGTTTTTT 
    AATCAACAAT ATTATATAAC ACGCCCTGTT ATTTTTTTTA TTAGGATACT 
    AGATATTAAC CTATAGTTTA ATGAAATTAG ACAACTTAAT ATTTTCTTTA 
    GGTATTTATT TTACATGTAT GCTATTCTTG TATTTGATTT AGATTTATAT 
    ATAACTAGAT CCTTATCCAT GCGAGATTTT ATATTTTAAA ATATGTATTG 
    TATAAAATAT ATAAGCAGTT TGCTTGTTTT ACTTGTTTCT ATTTTGGAAT 
    TTATATAATA GAATATAAAC CATAATATTA GAAATTAAAT GGATATTTAT 
    GGTCTGTGTT TTAAATAAAT TTTGGTGCAC AGTTTTTTTA ATATTTGATT 
    AGGTATCAGT TTTGAACATA AAGAAAAGTA AAAAATTAGT AAATTGTTTT 
    TGGTGAATGA TTGGATAGTT TTGGTAAAAA CATTTATACA TAAATTGGAG 
    TGGCAGATTT GGTGTGTTTC AGTTATAATA ATGTTTATGA GTTTTTTATA

AT4G06676.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Etoposide-induced 2.4 (InterPro:IPR009890); Has 264 Blast hits to 262 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 16; Plants - 79; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G06676.2

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Etoposide-induced 2.4 (InterPro:IPR009890); Has 261 Blast hits to 259 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 16; Plants - 81; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Link
InterPro Scan - TAIR