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GT13735

CSHL Arabidopsis genetrap mutant lines

Original: GT13735

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13735

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 306185 [Map]; Strand: c
      • AT4G00730.2 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
        Distance: -1677; Region: intergenic
      • AT4G00740.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 1246; Region: intergenic
    Flanking Genome Sequence: GT13735 - 5-prime edge 
    TTTGACCGGA AAAGTCGACG AATTATCATG TTTTTCAAAC AAACTTGACG 
    TAAAAGGTTC AATTCTTTGT TTGCAACGAC GAACTCATGA TCACTTCTCG 
    ACCGAATCTA CAACGAAACC CATATGTTTC TTCTACCCAA AAAAAAGTAA 
    AAAGAGATCT TCGAGTCATG TTGACCTTTA CGACTTCAAC TCATATTTGT 
    CCTTTCAAAA TTTGTCATGG CCATATTGTT GTCTCATGGA GAAACACTTT 
    TGAGCCAACA GTCGGAAAAC ACCCATCACT TAGCATTTTT TTATTTTAAT 
    ACTACTATTT TTTTTTTGGA AT

AT4G00730.2

Model type
Protein coding
Short Description
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary
Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development
Computational Description
ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00740.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G10440.1); Has 1057 Blast hits to 1046 proteins in 101 species: Archae - 2; Bacteria - 148; Metazoa - 0; Fungi - 0; Plants - 904; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR