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GT13776

CSHL Arabidopsis genetrap mutant lines

Original: GT13776

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13776

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16891191 [Map]; Strand: c
      • AT2G40440.1 - [+] show detail - BTB/POZ domain-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT13776 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAAGTAGA AGCACCCTCA 
    TCACCACTGT CCCCTGCCTT AAGCCGTACA TCGACTTGAC GTTGTTCTTT 
    CAAAATCTTT GCAAATCCAC CCACGAAAAG CTCTTTGTTG GTTTCTGTTG 
    CCATGTTTTT AAAGTATATA TCGTGGATAT GATTTAGTTA ACGATTGTGG 
    GTTATTATAT ATAGAACCTA GGCGGTCAAA ATTACTATTT TGCTTTCTTT 
    TCCCAATACT TTTGGATTTG GTCAAGGAGA CATTAATACA TTAGAACTCG 
    GAATTTAATT TGCACTCATT AATAGGAGAC TTTATCAGAC GAATACAGAA 
    TTTTAAGTTT TGTGTTATGG TTTGTTTACC TCTTCTTACT GTCTCTTGCA 
    CTTCTGTGTA TGGCACACTA AACAAGAATG TAAAAGACTC TAGCTAAAAT 
    TTTATAAAAT AGGAACCTTA CTTATAGTCA GGAAAGAATG ATAGGAATGC 
    ACTAAAAAAG CTTGCGACGA AAAAAAAAAA AAAAAGGGGT GGCCAAAATG 
    GGGTTTAAAA TTTTTAAAAA ACCCCCTTTT TTTTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16891110 [Map]; Strand: c
      • AT2G40440.1 - [+] show detail - BTB/POZ domain-containing protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT13776 - 5-prime edge 
    GCTTCTACTT CTGCCATAAG CTTGTTCTTG CTCTCTCGTA CTATCGTTTC 
    TCCTTTTAAA TCATCATCTA ATTTCATAAA GAAATTCATC CAAATGCTCT 
    TACTTGAACT GATTTTCATT GTTAATTAAT GCTCTTTTCT TGATATAATT 
    AATAGTCTGC AAGATCAGAG GTGTTTAAGA AGATGTTGGA GTCAGACGAG 
    ATCAAGGCTT CGGCTCAACT AGAGACAATC ACTCTCTGTG AGATGAAACA 
    CGAAGAATTA GAGGCTTTCA TTGAATTCAT

AT2G40440.1

Model type
Protein coding
Short Description
BTB/POZ domain-containing protein
Computational Description
BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT2G40450.1); Has 178 Blast hits to 120 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR