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GT13824

CSHL Arabidopsis genetrap mutant lines

Original: GT13824

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13824

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19797074 [Map]; Strand: w
      • AT1G53130.1 - [+] show detail - Stigma-specific Stig1 family protein
        Distance: -1530; Region: intergenic
      • AT1G53140.1 - [+] show detail - Dynamin related protein 5A
        Distance: -2164; Region: intergenic
    Flanking Genome Sequence: GT13824 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCTTAATT 
    TATTTGCATG TCATGTGCGG CATAGAATTT AGAATCAATG ATCAGAATAT 
    ATAATTAATG AACAATACAT GATCATTATT TCTCACATAT TTCAATATAA 
    GTTGTATATT TATAAGATTA TAGTATCATT ATTTCCTCCA ACTTTTCTGT 
    TGTTGTTTAG GTCAACGAGC TAGTAAAAAG GGGTTAATGG TCAACGGCTC 
    AACGTTATGG ACTTCACGGT CCGAGTAAGT TAATCAACTT AGAAGGTGAT 
    GAAACGACTG TCACGAACAT TTGATAATGA CACGTAGAGG TAGAGAGAGC 
    ACATTACAGT CGCCAGGTTC CGTTGCGTAG TAAGCGTAAC CGGTGTGTGA 
    ATCTTACCGG CTTTAATGGC AACAAAGAAG GATCTAGTTC CACCGTCACC 
    ACACGTGCAA CGTTTGAATA AAACTCTTGT TTTAAGAGAC AACTCATGTA 
    CATGCACTTT GATGATTTCA AAGAGCACTT GTGCTGTTTT GTTTCAGTCA 
    TGTGTGTTGT TTGTTCCATT ATGGTTTTTA GCCTAAATTA ATTAGTTTGA 
    CTCTCTTTTC TTATTGTTTT CGTACACGAA GTCACGAATC TAATTCATAC 
    TCGAGATCAA ACAAGTTTCA AATTTACATA ATAAAGGTAT TATAATACAA 
    CAGAACAAAT GTAACCTTTT ATCATCAATA ATATTGATTC AATTATGATA 
    TGTATTGAAA

AT1G53130.1

Model type
Protein coding
Short Description
Stigma-specific Stig1 family protein
Curator Summary
Encodes GRIM REAPER (GRI), involved in the regulation of cell death induced by extracellular ROS (reactive oxygen species). Secreted into the extracellular space.
Computational Description
GRIM REAPER (GRI); CONTAINS InterPro DOMAIN/s: Stigma-specific protein Stig1 (InterPro:IPR006969); BEST Arabidopsis thaliana protein match is: Stigma-specific Stig1 family protein (TAIR:AT4G26880.1); Has 276 Blast hits to 191 proteins in 30 species: Archae - 0; Bacteria - 84; Metazoa - 0; Fungi - 32; Plants - 157; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G53140.1

Model type
Protein coding
Short Description
Dynamin related protein 5A
Curator Summary
Encodes DRP5A, a dynamin protein involved in cytokinesis in Arabidopsis.
Computational Description
Dynamin related protein 5A (DRP5A); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: cytokinesis; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin, GTPase domain (InterPro:IPR001401); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G19720.1); Has 2347 Blast hits to 2342 proteins in 280 species: Archae - 0; Bacteria - 0; Metazoa - 1001; Fungi - 589; Plants - 464; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink).
Link
InterPro Scan - TAIR