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GT13906

CSHL Arabidopsis genetrap mutant lines

Original: GT13906

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13906

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23160900 [Map]; Strand: w
      • AT1G62560.1 - [+] show detail - flavin-monooxygenase glucosinolate S-oxygenase 3
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT13906 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAACTTGG TGGAAAGGTT 
    TGTGGAAAAA TAAATTTAAA TTTTTTTGCA GAAATTCTGT AGTCCGAACA 
    AAAAAATGAG AGTTAAAAAA GCTTGGGCTG CAAGCCAAAC TTGAAAAGCT 
    GCATCATACC TCCTATCACC CAAGCGTCTG ATAGAGCTAA TTTTAATTTC 
    TAAATGCATA CGAACAATGC TTTTACTTCC AAGAACTGAG AGAGGGAGTT 
    CTTCCACATA GACGCAATGA TGTAGAAAGT TTTCTTAACC TAGACCATAT 
    GAATTACCTT CTTTTACAAA AGAAAAAAAA AAATCCCTTC TTTTTCAAAG 
    G

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23161008 [Map]; Strand: w
      • AT1G62560.1 - [+] show detail - flavin-monooxygenase glucosinolate S-oxygenase 3
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT13906 - 5-prime edge 
    AAAACGCTAT TTTTTCTTTG AATATAATTT AACATTAAAT TTTTTAAAAA 
    ATAGTTCTAT TTAAGTTTTA ATATATAACT GTAAGTTGGT CCACAAAATT 
    ATATATCATA ATTAATTTCA TTTACGATCT GCATTATTGT ATTGATACTT 
    TGGCAGGTGG TGGTGGTCAT TGGAAATTTT GCGAGTGGTG CCGATATTAG 
    TAGGGACATA GCTAAGGTCG CAAAAGAAGT CCACATTGCG TCTAGAGCAA 
    GGGAACCCCA CACATACGAG AAGATTTCCG TTCCCCAGGA CAATCTATGG 
    ATGCATTCCG AAGTAAAACT AAAACTTTAT TTAATCGAAC AATGATTTGG 
    ATTATATGAA CATTCATCTC ACTCGACC

AT1G62560.1

Model type
Protein coding
Short Description
flavin-monooxygenase glucosinolate S-oxygenase 3
Curator Summary
belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates
Computational Description
flavin-monooxygenase glucosinolate S-oxygenase 3 (FMO GS-OX3); CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin-monooxygenase glucosinolate S-oxygenase 2 (TAIR:AT1G62540.1); Has 15604 Blast hits to 15117 proteins in 1989 species: Archae - 85; Bacteria - 8709; Metazoa - 1148; Fungi - 1456; Plants - 809; Viruses - 0; Other Eukaryotes - 3397 (source: NCBI BLink).
Link
InterPro Scan - TAIR