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GT13939

CSHL Arabidopsis genetrap mutant lines

Original: GT13939

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13939

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29513017 [Map]; Strand: c
      • AT1G78440.1 - [+] show detail - Arabidopsis thaliana gibberellin 2-oxidase 1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT13939 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTATTTCCTT GTTTGATAGA 
    ATTTTTTTGA TTTTGATAGC TTTGAAGGCT GAGACATTGG GTTATGTACT 
    CGGAGGAGTG TATATATAGC AGATGAGATG ATAAAGATCT TACAACGACG 
    TACGATCAAA ACTGTTCAAA ACTAAAGCTA ATCACTTATT TTTTTCTCTT 
    TTATGTATCT ATATCAATAA AATTGAATAT ATCGGGACGA TATTTGCGAA 
    AGCCTCCATT GTGATTAGTT ATTTGCTAAA TAGTAAAAAA ATCGTTTAAA 
    ATGGTTTGTC AACAGTTTTT TGTTTTTGTT TTAATTATCA TGGACGTCAA 
    TGTTTGGTTT TTGGGGTTAA AGTACAGAAG TCAAATTTAA AGAAGAATTA 
    TCGAGATAAA ACATACAATA TTTGAGAGCG ATAGGAATTT GATATTTTAT 
    GGGAGTTTGT TGGCTGACAA CATAATCACT AGTTGCGTAC TAGTTTTCCC 
    TCATAATTTA TAAGTATCCT TTTTTTTTAT TATTATTGCT GATTTGCCTC 
    CTCTATGTAT TCATCACCTA GTTTCGGTGA TTATAACAAC TCATGAGTCA 
    TGACCCGGCG ACCAACCATG ACCTCGTCAA CCGGTCCGAT GAATCTAATT 
    CGTTCTTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29512941 [Map]; Strand: c
      • AT1G78440.1 - [+] show detail - Arabidopsis thaliana gibberellin 2-oxidase 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT13939 - 5-prime edge 
    CTCCCTGCAA GGAAATATAT CAATGGCGGT ATTGTCTAAA CCGGTAGCAG 
    TACCAAAATC CGGATTCTCT CTAATCCCGG TTATAGATAT GTCTGACCCA 
    GAATCCAAAC ATGCCCTCGT GAAAGCATGC GAAGACTTCG GCTTCTTCAA 
    GGTGATCAAC CATGGCGTTT CCGCAGAGCT ATTCTCTGTT TTAGAACACG 
    AGACCGTCGA TTTCTTCTCG TTGCCCAAGT CAGAGAAAAC CCAAGTCGCA 
    GGTTATCCCT TCGGATACGG GAACAGTAAG ATTGGTCGGA ATGGTGACGT 
    GGGTTGGGTT GAGTACTTGT TGATGAACGC TAATCTTGAT TCCGGTTCGG 
    GTCCACTATT TCCAAGTCTT CTCAAAAGCC CGGGAACTTT CAGGTTTTTA 
    AATGTCCCTT GCTTTGATAA CACACCTTTC ATTCTCGTAC TCTGTTTCGT 
    GCTCTGTTTT CGAGTTAGTG CTCTGTTTTT TGCTCTGTGT TTGTTTTTAT 
    AGTTCATGTT CTATAGCTTT TTATGCTTTA TTCTGGATTT TTTTTGTGGT 
    TACGTCTCAA GTTTTGTTCT TTAATCTTCA GAAACGCATT GGAAGAGTAC 
    ACAACATCAG TGAGAAAAAT GACATGCGAT GTTTTGGAGA AAGATCACAG 
    ATGGGCTAGG GATCAAACCG AGGAACACAC TTAGCAAGCT TGTGTCTGAC 
    CAAAACACGG ACTCGATATT GAGACTT

AT1G78440.1

Model type
Protein coding
Short Description
Arabidopsis thaliana gibberellin 2-oxidase 1
Curator Summary
Encodes a gibberellin 2-oxidase that acts on C19 gibberellins.
Computational Description
Arabidopsis thaliana gibberellin 2-oxidase 1 (ATGA2OX1); CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase (TAIR:AT1G30040.1); Has 8410 Blast hits to 8364 proteins in 975 species: Archae - 0; Bacteria - 1063; Metazoa - 88; Fungi - 964; Plants - 4898; Viruses - 0; Other Eukaryotes - 1397 (source: NCBI BLink).
Link
InterPro Scan - TAIR