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GT14002

CSHL Arabidopsis genetrap mutant lines

Original: GT14002

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14002

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17522402 [Map]; Strand: c
      • AT4G37235.1 - [+] show detail - Uncharacterised protein family (UPF0497)
        Distance: 2617; Region: intergenic
      • AT4G37240.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-ter...
        Distance: -2059; Region: intergenic
    Flanking Genome Sequence: GT14002 - 5-prime edge 
    CCTACTTTAT CCCTGCTTAC AAGCTGAAAT CAATAATCTA AACCTTGATG 
    TATAAAATTA TTTATCGAAC ATTAAATTCA TCAAATATGT GTTATTGGAC 
    AAGTTGAAGC AGTTATGTCA TACGCTTATC GTAACACATT AATTTTACAG 
    TAAGAGAATC CACCGAATAC CATTCTACTA TCTCACCGTT TCACTATATA 
    TTGACATTGT ATTGTTTACC CTTTATAATT GTAGTTTTCT ATTTTGGTGA 
    GCTATTATAT TTTTTATTCC AAACCGTTAA TGGTGGATAA TAATATGAGA 
    CATTCTGCTT ACTGCTTTAA ATGTAATAGA CACAAATTTC TTCTACGACA 
    GAAGGACTCG ATTAATAATA GATGAGTTTG AAAAAATATG TTTGCGATTA 
    GGGAATTGTT TAAGCTGTAC TGTCGAAGTA ATGCTTGTTA GTTGTAACAC 
    ACTCATAATC TGTGTTTTAA TTTTGTTGTA CAAAATAATG TCTCTTTTCT 
    GTTATAGATA CTTGTGTCGT AATAATGTGT GACTATTTGG TTAATTAGTG 
    TTTCTTTTTG TTTTTGTAAT TTATCGTAAA TAAACATGAG CTTGCAAAAA 
    TAACTAACAT TATTATTAGA AAAGTTTGTA TAAACGTAGA ACAAGAAAGC 
    GAACGTCACA TGCTCCATGC TTTTGTATGA AGCTTCATGT ATGCTCCCCC 
    TCA

AT4G37235.1

Model type
Protein coding
Short Description
Uncharacterised protein family (UPF0497)
Computational Description
Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G50810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G37240.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR