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GT14055

CSHL Arabidopsis genetrap mutant lines

Original: GT14055

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14055

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 254792 [Map]; Strand: c
      • AT3G01680.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR02164...
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: GT14055 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACTACGA TGTAAGAGTT 
    GACTAGCTAT GGGGGTCAAT TATTTCGATT CGGTTCGGTT CAATTGGTTT 
    TTGAATGATT TTGTGTGTTT GAAAACGTTG ATTAGGTGAT GTAAGGAGAT 
    CAAAAAGATA CTAAGCTACT ACAAGCTTGG AGGATGGGCA CTACTGAGCA 
    AAGGACCTGA GATAGTGATG ATCGCTCACG GTGCCTTAGA GAGGACTATG 
    AGTGTTTACA ACCGGACCTG GAAAACCCAC GTCCCGACCA AAGGCTACAC 
    CAAAGCAATG TCCGACCACC ACCACGATGA GGTCCTCCGT GAAACCGGAA 
    AACCTTGCGG CCACTTTGAT TTCCACATCA CTGCTCGGAG CGGTCGGATT 
    CCGGAGAAGA TGAATTGCTT CGAGTGTCAG CGTCCGATGG AGAAGTACAT 
    GAGCTTCTCT TCTTCTCACT ATAAAAAGCT CCACGAAGAC GAGAACTACA 
    ACTTCTAAAT GATGCAATAA GCTCACGTCT CTTCCCGCTG CTTTTTCTTT 
    TTGTTTTACG TAATTTGAAT TCTCTATATA GTTTTTCATA AATAATTTCT 
    GAATTTCAAT GTCTTTGTAT GAGAGAGAAT TGGTCATTCC ATGTGTGTGG 
    TTTGGCCTTT GTGGGACATG TTCGATTGAA GTATTCCTAA TAATTTTCAA 
    TAATTAACAA TTTCTTCTCT TAATACCATA GATAAATGTT GAATTTATTT 
    TGTTAATAAA ATTAACCCTG ATGAATACAA CAATTTTGAA TATGTCAAAT 
    TAAACCAATT CAAAATATAA CTATTTGCTT TTCTTTTCAT CTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 254731 [Map]; Strand: c
      • AT3G01680.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR02164...
        Distance: 0; Region: exon8 (CDS)
    Flanking Genome Sequence: GT14055 - 5-prime edge 
    TCCATCCTAC TTTCATCCCT GCATCGTACT GATCATCGGC TTTACCGAGT 
    TGAATCTTGG AGTACAACAT GCTCTCGAGC CTAGTCCAGA AGAACCACAT 
    CAAGGCAGGT TCGGCCCAGC TATGGCTCAG GTTTTCCCCA CCTGATTACT 
    TCACTG

AT3G01680.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR