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GT14065

CSHL Arabidopsis genetrap mutant lines

Original: GT14065

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14065

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30143238 [Map]; Strand: c
      • AT1G80130.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -592; Region: promoter
    Flanking Genome Sequence: GT14065 - 3-prime edge 
    AGAGGTTTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA GATTTATGAA 
    TATTATTATA TGAATCTGAT TGGTCCTATA TATCCCATTT TTACATCAAC 
    ATAAGGAATC ACTTGGATGT GATGCCTGAG GTTGAAATGT TCGATATTCA 
    ATTTCTTCTT ATTTTGCGGA GGCGCAGTCG AGTTATTCAT AAATGTAATT 
    AAGATCCGAT ATTGAGACGG TCGTTATCTG ACAGACAGGT AAACCAAAAC 
    GTACGGTGTG GGATTGTGCT TTGATGACTT GCGAAAAGGT CTTCGTTACT 
    GGAATTTGGA ACTTTATGCT TAGTAGGCCC ATATCCTTAT TTTTCTATTC 
    CGGCTGCTCT TTGTAGGCCC ATAACAATTC AGGCCCACAA TTAGTACGCA 
    TGTGGATCCG TGTGCCATTC GACATGCATG ATACATATAG ATGAGATGAC 
    AAACACATCA TCAACTTTTT TTCCTTTCTT AATACACACC AATACACCAT 
    GACTATCAAT GAACACATGC CAAGCCACGA GTAAATGTTT ACCTGATTAC 
    ATATCGAAAG ATTGTATAAT TCCCGACAAT ATCCAATGAA CCACCATCAT 
    GATGCCATCA TTCATGGGTC AGATCATGAA CATCCATGAG AAGCAAGACA 
    CTAGATAAAT AATGTATATA TAGATACTAT TCTTAA

AT1G80130.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: response to oxidative stress; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G20190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR