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GT14070

CSHL Arabidopsis genetrap mutant lines

Original: GT14070

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14070

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6968160 [Map]; Strand: w
      • AT4G11470.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 31
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14070 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCTCTACTTG GAACCTCATA 
    GTATTGTAAA CTGCGTGAGT AGGCTCTAGA GCCATCTTGT TGAAAAACGA 
    GTTGTTAGAG TAACGAACGA AACAGAGCGC CTTGTCGGCG TTGTCACCTG 
    TCCAGTAGAA TGAGTCGGTC TGGTTCGGAC AGTTTTGTAA TAAACCTTGA 
    GACGCGGGTT GGATACAATC GGAACACACC CTTGGATCAG ACCCTGGGGT 
    ACAGAGACCT AAGGCATAGA TTCTTCTTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3277956 [Map]; Strand: w
      • AT3G10520.1 - [+] show detail - haemoglobin 2
        Distance: -96; Region: promoter
    Flanking Genome Sequence: GT14070 - 3-prime edge 
    AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT AGCATTAGGT 
    AGTAGATGTT TTACTACAAA ATAAACATAT TTAGTCAAAT AAAATAAAAT 
    TTGAGAGAAT CTTCTACATA AGTAGCTCAC AGACCCAACC AAAGGACCAT 
    TGAATACCAT ATATATATAG ATACACAGAC ATATAAACAC ACAAATATTC 
    GTGTTTTTTT CAAACTGTGA GAGAAAAAGA AAGAGAGAAA GAGATGGGAG 
    AGATTGGGTT TACAGAGAAG CAAGAAGCTT TGGTGAAGGA ATCGTGGGAG 
    ATACTGAAAC AAGACATCCC CAAATACAGC CTTCACTTCA TCTCACTCGA

AT3G10520.1

Model type
Protein coding
Short Description
haemoglobin 2
Curator Summary
class 2 non-symbiotic hemoglobin
Computational Description
haemoglobin 2 (HB2); FUNCTIONS IN: oxygen transporter activity; INVOLVED IN: response to cytokinin stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leghaemoglobin (InterPro:IPR001032), Globin-like (InterPro:IPR009050), Leghaemoglobin, iron-binding site (InterPro:IPR019824), Globin, subset (InterPro:IPR000971), Globin (InterPro:IPR012292); BEST Arabidopsis thaliana protein match is: hemoglobin 1 (TAIR:AT2G16060.1); Has 878 Blast hits to 840 proteins in 285 species: Archae - 0; Bacteria - 313; Metazoa - 196; Fungi - 34; Plants - 318; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G11470.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 31
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 31 (CRK31); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 32 (TAIR:AT4G11480.1); Has 120832 Blast hits to 119169 proteins in 4439 species: Archae - 88; Bacteria - 13747; Metazoa - 44536; Fungi - 10306; Plants - 33929; Viruses - 433; Other Eukaryotes - 17793 (source: NCBI BLink).
Link
InterPro Scan - TAIR