1. Home
  2. Mutant Lines
  3. GT14115

GT14115

CSHL Arabidopsis genetrap mutant lines

Original: GT14115

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14115

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4654031 [Map]; Strand: w
      • AT1G13600.1 - [+] show detail - basic leucine-zipper 58
        Distance: -2562; Region: intergenic
      • AT1G13605.1 - [+] show detail - LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 24...
        Distance: -4507; Region: intergenic
    Flanking Genome Sequence: GT14115 - 3-prime edge
    ACCACTAAAT TCACCGGTAA GGAAACGAAT ACTAAATCGT CAGATAAGGT 
    CAAAATAAAG TTTGCTGAGG GCTTTTAAAG TCAATTAGTC AATGGAAAGT
    ATTGCACCAC TTTGTTTACT CTTTTGTTCT CTCACTCGAC
  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT14115 - 5-prime edge
    ACGGGCCCCC CCCTTTTCCC CC
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4654137 [Map]; Strand: w
      • AT1G13600.1 - [+] show detail - basic leucine-zipper 58
        Distance: -2668; Region: intergenic
      • AT1G13605.1 - [+] show detail - LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 24...
        Distance: -4401; Region: intergenic
    Flanking Genome Sequence: GT14115 - 5-prime edge
    TTCCATCCAC TTTCTCCCTG ATTGCTGGTG AATGGTAACA TGTCGTTTAC 
    AGTTTCATTC TGCACTTTTA CATCAGAAAC TTTATTTGGT CATTGATCGA
    TTTTATCTGT TGTTTGTTTT TGAATTTTTA ATATTGTAGT TTATTCTAAA
    AAAATATTTT CATATATCGT TCACTTATTT CGATATGTTA TCCATAATAT
    TCTTAGCTTA TTAATGTAGA CTATCTACTT TTTCTTTAGT TATGTTCATT
    TGATTTGGCA ATACTAACTA AAATATATAT CTCTTTTTGG GGTCAAAAAC
    TATATATCTT TTCCACAAAA TAATTGTTCT TAAAATAAGT AATGATTTTT
    AGAAGACTAT TTGACTCATT TTCCACAAAT GGCCTACTTA ATACGAACTT
    TAAATTTGAA AGATGCACAT GAGAATCTGT TAATCAAATC TGTATAGTTT
    ATAACTATCT ATAGAAACAC GAAACGTTGT TTAAGAAAGG GTAATAAAAC
    TTCCACAAAG TTTTCATGCA TTATAGAAAA

AT1G13600.1

Model type
Protein coding
Short Description
basic leucine-zipper 58
Computational Description
basic leucine-zipper 58 (bZIP58); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 48 (TAIR:AT2G04038.1); Has 2046 Blast hits to 2038 proteins in 142 species: Archae - 0; Bacteria - 6; Metazoa - 51; Fungi - 55; Plants - 1834; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G13605.1

Model type
Protein coding
Curator Summary
Encodes a defensin-like (DEFL) family protein.
Computational Description
LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR