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GT14132

CSHL Arabidopsis genetrap mutant lines

Original: GT14132

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14132

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1385344 [Map]; Strand: c
      • AT4G03115.1 - [+] show detail - Mitochondrial substrate carrier family protein
        Distance: 0; Region: intron1 (CDS)
      • AT4G03120.1 - [+] show detail - C2H2 and C2HC zinc fingers superfamily protein
        Distance: -316; Region: promoter
    Flanking Genome Sequence: GT14132 - 3-prime edge 
    AAACAAAAAT GCAGAAATAT AATCTCGAAC TTTATACTAA ATGGAGAAAA 
    CTCAACACCT TCATGTTTTA GTTTATGCGA AAGCAAATCA AAAGATTCGA 
    TGATCTTGGG ATTGAAATTG AGGCATATAC AGAGAGCAAA AAGATCCGAC 
    GAACCTGGGA TTGAAGTCAC CGGCGGGGAA GATATCTCCG ATCATTTTGT 
    TTTTTCCGTT ATTCTTTCTT GGGGAAA

AT4G03115.1

Model type
Protein coding
Short Description
Mitochondrial substrate carrier family protein
Computational Description
Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: plant uncoupling mitochondrial protein 1 (TAIR:AT3G54110.1); Has 24483 Blast hits to 13698 proteins in 441 species: Archae - 0; Bacteria - 0; Metazoa - 9864; Fungi - 7121; Plants - 4898; Viruses - 3; Other Eukaryotes - 2597 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G03120.1

Model type
Protein coding
Short Description
C2H2 and C2HC zinc fingers superfamily protein
Computational Description
C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type matrin (InterPro:IPR000690); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR