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GT14246

CSHL Arabidopsis genetrap mutant lines

Original: GT14246

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14246

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 615852 [Map]; Strand: w
      • AT2G02330.1 - [+] show detail - pseudogene, similar to P0443G08.20, blastp match of 37% identity and 7.2e-16...
        Distance: -1260; Region: intergenic
      • AT2G02340.1 - [+] show detail - phloem protein 2-B8
        Distance: 236; Region: intergenic
    Flanking Genome Sequence: GT14246 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    AGATTAAAGG ACATTAATGC ATATAAGGGT ATTTTCGTAA ATATGTGTGG 
    GTGACTCAAA AAACGAGTCT TTTTCTTTTG AATATTTTAG CGGCAAAGAC 
    GCTTGTAGAG ACAAAACACG GTTTTGAGTC TTTTCTTTGA CTCAAGCAAG 
    ACTCTAGAGG CAAAGGCAGA GATATTTGTG GTTGTAATGT TTGTGATTAT 
    AATGTACATG ATTCTTTGAT GAACAAAATT CGATACTAAA AACATAGTGT 
    TTTGATCATC TAAAACTCTA ATGTCGACTT TAATTTAAAT CACATTTATT 
    ACAATAATAT AAGTCGGTAA TGTTGGTGAT ATGGTTCAAA AATGCCCAAA 
    CGTGTTTTCT GTTTTTGTTT GTAGAAAATT CCAGAGTCAA CTAAAGAGTT 
    TGCTTTTCGT TTTGTATTTG TTAGCTCTTT CTTTTCAATT TTTTTTATTA 
    AATGTGGAAA AACAGTTTTT CGATTACTGT ATTATTGATT TCTAATATGT 
    TAAAAATGCT TCTATGTAAT AAAAAATGTG AAAACTACTT TAAATAACCG 
    AATTTGTGAT CAATTTCTAA ACCATTGTTT AGTAAGTCTT AGTGAAACAA 
    AATTGTTTAA CAAAGTGATG AAAAAGTTCA GAAATAAGGA AGAACATATG 
    ATGCATTTGT

AT2G02330.1

Model type
Pseudogene
Computational Description
pseudogene, similar to P0443G08.20, blastp match of 37% identity and 7.2e-16 P-value to GP|28812128|dbj|BAC64996.1||AP004461 P0443G08.20 {Oryza sativa (japonica cultivar-group)}
Link
InterPro Scan - TAIR

AT2G02340.1

Model type
Protein coding
Short Description
phloem protein 2-B8
Computational Description
phloem protein 2-B8 (PP2-B8); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B7 (TAIR:AT2G02320.1); Has 560 Blast hits to 546 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 560; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR