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GT14369

CSHL Arabidopsis genetrap mutant lines

Original: GT14369

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14369

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19388133 [Map]; Strand: w
      • AT2G47230.1 - [+] show detail - DOMAIN OF UNKNOWN FUNCTION 724 6
        Distance: 0; Region: exon2 (CDS)
      • AT2G47230.2 - [+] show detail - DOMAIN OF UNKNOWN FUNCTION 724 6
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT14369 - 3-prime edge 
    AGGCCTAAGA TCTGAGTGTT TAACCACTGG TTCCTCCTTT GTAACCACTA 
    AACAAACCAT GTAACAGTTG TGATCGAGAA CTCCTCTTAC CAAACCTTGA 
    CGCCATACCG AACCACGAAA CACCTCCACA CGATCCATCA ATTCGTACTT 
    TTCAACTGGA AAAGGAGGCG GTGTGGGTCT AACACGGGAC GAATCAATGG 
    TACTGTTGGT TCTCGCCTCA TCACCACTAA AGCTCAAGTG TTTATTACAG 
    TCCTTCACGA TGAATTTCAT CTCACTCGAC

AT2G47230.1

Model type
Protein coding
Short Description
DOMAIN OF UNKNOWN FUNCTION 724 6
Curator Summary
Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins.
Computational Description
DOMAIN OF UNKNOWN FUNCTION 724 6 (DUF6); FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395), Protein of unknown function DUF724 (InterPro:IPR007930); BEST Arabidopsis thaliana protein match is: Agenet domain-containing protein (TAIR:AT1G26540.1); Has 654 Blast hits to 571 proteins in 116 species: Archae - 0; Bacteria - 26; Metazoa - 156; Fungi - 34; Plants - 356; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G47230.2

Model type
Protein coding
Short Description
DOMAIN OF UNKNOWN FUNCTION 724 6
Curator Summary
Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins.
Computational Description
DOMAIN OF UNKNOWN FUNCTION 724 6 (DUF6); FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Agenet (InterPro:IPR008395), Tudor-like, plant (InterPro:IPR014002), Protein of unknown function DUF724 (InterPro:IPR007930); BEST Arabidopsis thaliana protein match is: Agenet domain-containing protein (TAIR:AT1G26540.1).
Link
InterPro Scan - TAIR