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GT14395

CSHL Arabidopsis genetrap mutant lines

Original: GT14395

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14395

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15683969 [Map]; Strand: w
      • AT4G32500.1 - [+] show detail - K+ transporter 5
        Distance: 0; Region: exon9 (CDS)
    Flanking Genome Sequence: GT14395 - 3-prime edge
    GAAAGTAGGA TGGGAAAATC CCGTACCCGA CCGGATCGTA TCGGTTCATC 
    TCACTCGACT ACCCCGATTG ATTTCCTGAT GCAGGTATAA ATCGACTCCT
    CTCGGTGCTC GGGATATTCA GCTGAGTAGG ACGGTCCCTG TTCCCCTGGA
    CCTACTTGCC TTCTGGGATC GCCTCGATGC CTTTCATCTC TGGATCTGTT
    GAGTCTTTCA GATGCTGCAT TAGACCAAAA CATATCCCAG ATGAGAAAAA
    ATAGTCAAAC CAGCTAAAAT GTTGTAGTCC CTATGGATTT ATACGGAAAT
    AGCTTCGGAC TAATCTGAAC AAGATTATTC ATGATTATTG CCCCATCACC
    AACGTTTGCC CTGAACAAGA TTTAAGAATG CTGTACGGTT CAGACGAAGC
    AATTGACTCA ATCGTTTGGT TCGAACTGTG AACAACTGTG GCCTGT

AT4G32500.1

Model type
Protein coding
Short Description
K+ transporter 5
Curator Summary
Encodes AKT5, a member of the Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).
Computational Description
K+ transporter 5 (KT5); FUNCTIONS IN: inward rectifier potassium channel activity, cyclic nucleotide binding; INVOLVED IN: potassium ion transport, N-terminal protein myristoylation, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Shaker pollen inward K+ channel (TAIR:AT2G25600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR