Home
Mutant Lines
GT14410

GT14410

CSHL Arabidopsis genetrap mutant lines

Original: GT14410

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14410

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 19599141 [Map]; Strand: c
- AT2G47860.2 - [+] show detail - Phototropic-responsive NPH3 family protein
  Distance: -807; Region: promoter
- AT2G47860.3 - [+] show detail - Phototropic-responsive NPH3 family protein
  Distance: -807; Region: promoter
- AT2G47860.1 - [+] show detail - Phototropic-responsive NPH3 family protein
  Distance: -838; Region: promoter

TCCTACTTTC TCCCTGCCGG AGGTAGCTCA AACGAGTTAA CAAGAAAAAC 
AAAAAGTTTA CTACTCCTAA CCTATTAATA CGCAATTCAT TAAAATACTA 
CATATATCAC TTAAGCAAAG CTATATTTTG GTAAATATTT TGTTGTTAGA 
TTTCACAACA AATTACAATT TCCCACTCTA CAAAATCCAA ATCCAAAGCC 
GGATGTCCAA GTTTAGTTGA TTTCATCTTC TTCCTTGGGC TTTTGACAAA 
AAGAAAAGTA AGAGTGTAGA GAGAGAGAGA CAAGTGGGGA AGGCAAATAA 
GAGCAAATGA TGGCGAAGCA TATTAAATTG AGCATGATAG TTTCTTTTCT 
CAGGTAGGGT TTTCTCTAAA GATTACTTCC TTCTCCATAT TGTTTTAAAA 
CTTGTTTCTA GGCCATCATT TCTCTCGTCT CTTTTTTTGA ACCACTTTCC 
CGATGCTATT GATCGATTCT AGGATTAGAG TGCTTCCGCT CAACTTCATT

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 19599098 [Map]; Strand: c
  - AT2G47860.2 - [+] show detail - Phototropic-responsive NPH3 family protein
    Distance: -850; Region: promoter
  - AT2G47860.3 - [+] show detail - Phototropic-responsive NPH3 family protein
    Distance: -850; Region: promoter
  - AT2G47860.1 - [+] show detail - Phototropic-responsive NPH3 family protein
    Distance: -881; Region: promoter
Flanking Genome Sequence: GT14410 - 5-prime edge
```
AGAAAAAAAA AAGTTTACTA CTCCTAACCT ATTAATAAGC AATTCATTAA 
ACTACTACAT ATATCACTTA AGCA
```

5 prime edge [+] show sequence

Chromosome: 2; Position: 19599139 [Map]; Strand: c
- AT2G47860.2 - [+] show detail - Phototropic-responsive NPH3 family protein
  Distance: -809; Region: promoter
- AT2G47860.3 - [+] show detail - Phototropic-responsive NPH3 family protein
  Distance: -809; Region: promoter
- AT2G47860.1 - [+] show detail - Phototropic-responsive NPH3 family protein
  Distance: -840; Region: promoter

CTACTTTATC CCTGCCGGAA GTAGCTCAAA CGAGTTAACA AGAAAAACAA 
AAAGTTTACT ACTCCTAACC TATTAATACG CAATTCATTA AAATACTACA 
TATATCACTT AAGCAAAGCT ATATTTTGGT AAATATTTCG TTGTTAGATT 
TCACAACAAA TTACAATTTC CCACTCTACA AAATCCAAAT CCAAAGCCGG 
ATGTCCAAGT TTAGTTGATT TCATCTTCTT CCTTGGGCTT TTGACAAAAA 
GAAAAGTAAG AGTGTAGAGA GAGAGAGACA AGTGGGGAAG GCAAATAAGA 
GCAAATGATG GCGAAGCATA TTAAATTGAG CATGATAGTT TCTTTTCTCA 
GGTAGGGTTT TCTCTAAAGA TTACTTCCTT CTCCATATTG TTTTAAAACT 
TGTTTCTAGG CCATCATTTC TCTCGTCTCT TTTTTTGTAC CACTTTCCCG 
ATGCTATTGA TCGATTCTAG GATTAGTGTG CTTCCGCTCA A

AT2G47860.1

Model type: Protein coding
Short Description: Phototropic-responsive NPH3 family protein
Computational Description: Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G03010.1); Has 884 Blast hits to 856 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 876; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47860.2

Model type: Protein coding
Short Description: Phototropic-responsive NPH3 family protein
Computational Description: Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G03010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47860.3

Model type: Protein coding
Short Description: Phototropic-responsive NPH3 family protein
Computational Description: Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G03010.1).
Link: InterPro Scan - TAIR