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GT14435

CSHL Arabidopsis genetrap mutant lines

Original: GT14435

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14435

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15684017 [Map]; Strand: w
      • AT4G32500.1 - [+] show detail - K+ transporter 5
        Distance: 0; Region: intron9 (CDS)
    Flanking Genome Sequence: GT14435 - 3-prime edge
    AAACGGTAGA GGTTTTTACC GACCGTTACC GACCGTTTTC ATCAGGGATG 
    AAAGTAGGAT GGGAAAATCC CGTACCCGAC CGGATCGTAT CGGTTCATCT
    CACTCTAGAG CCTCGTTTCA GCAACTGATG CAGCAGTAAA TCGTCTCCTC
    TGGCTGCTGC AAAACATAAG CTGAGAGGTA AATCCATTTT CCCCTGAGCC
    AACATGAGTT CTGTCTCAGC CAAAATGCCT TTCATCACTG GATCTGTTGA
    GTCTTTCAGA TGCTGCATTA GACCAAAACA TATCCCAGAT GAGAAAAAAT
    AGTCAAACCA GCTAAAATGT TGTAGTCACT ATGGATTTAT ACGGAAATAG
    CTTCGGACTA ACCTGAAGAA GATTATTCAT GATTATTGCC CCATCACCAA
    CGTTTGCCTG AACAAGATTT AAGAATGCTG TACGGTTCAG ACGAAGCAAT
    TGACTCAATC GTTTGGTTCG AACTGTGAAC AACTGTGGCC TGTAACATAG
    AACCCCAACT TCACCAAAAA CATGGCCGGT CTGTGCTTCA CCAACTACCT
    GCAATGAATA CACAACTCAC AACTTAAAAA CCGTCACAAA AGAGAAATAA
    AAATGCGGAT TTTACCTGAT CCACTCCATT CACACGCGCA ATGATGTCCT
    GTCATATAGT AGAAATGTCA ACTAATTTGA AAAAAGAACT AGGAGAAATA
    GAATTGTTTA GCTGATGTAA CCAAAGCAAC TTACAACAGC TCCTGTGACC
    ATTATGTAAA

AT4G32500.1

Model type
Protein coding
Short Description
K+ transporter 5
Curator Summary
Encodes AKT5, a member of the Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).
Computational Description
K+ transporter 5 (KT5); FUNCTIONS IN: inward rectifier potassium channel activity, cyclic nucleotide binding; INVOLVED IN: potassium ion transport, N-terminal protein myristoylation, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Shaker pollen inward K+ channel (TAIR:AT2G25600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR