1. Home
  2. Mutant Lines
  3. GT14494

GT14494

CSHL Arabidopsis genetrap mutant lines

Original: GT14494

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14494

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3377823 [Map]; Strand: c
      • AT5G10690.1 - [+] show detail - pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing pro...
        Distance: -372; Region: promoter
      • AT5G10695.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
      • AT5G10695.2 - [+] show detail - unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellula...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14494 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGT 
    GTTTGGTGTT CGTGTGTGAT CAGGACGAGA GGGTGATCGG AAGGTACGCA 
    GCTCCTGGAG CGTGTCCGTA CTGCGGAGGA GCGGTTCAAG TGGTTGACGT 
    AAATAGCCAG TGGAGATTCT GCTTCGTTCC TCTCTCTAAT AAATCCAAAC 
    GTCGTCATCT CTGTTCCACT TGCGGCAAAC GACTCATCGT CCATGGCTGA 
    AAACAAAAAT CCCACCTCAT ACGAGATCAT TTCTATATGT ACATATATCC 
    AAATCTCTGA CTTGCTTTGT GTATCGTGTT TCTAAACGTT TGTAAGAAAA 
    AGAAAAGAAC ATGTCTTCTC TTTTATGATT TCTCTGTATA TGTATGAATC 
    ATGATTATGA AAATGAGAAT TTTAAGAAAT TGGGATTTTG GAGAACAAGA 
    ATGATCACTT GCAAAGCTTG AGCTTTTTGA AGAAAGAAGA GACTTGGGAT 
    TTAGGATAAG GCTTTGTAGC AATACACGTC GGAATATTCT CCGGCTGCTC 
    CATCCATAGC TTATGAGAGA TTCCTCCTAA T

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17455165 [Map]; Strand: w
      • AT1G47530.1 - [+] show detail - MATE efflux family protein
        Distance: 744; Region: intergenic
      • AT1G47540.2 - [+] show detail - Scorpion toxin-like knottin superfamily protein
        Distance: 368; Region: intergenic
    Flanking Genome Sequence: GT14494 - 5-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC TCAAGAGAGG CTCTCTTGAG 
    TCTTTTGACC TTGTAATCTC TATTATTGGA AATTTATGAA GAAAAAAAAG 
    AGTACTTGTC AAAAGATAAT CTTATAGTTG GGTTTTACTG TAAGATATTG 
    AAGTTTCGAT GTTTTACTTA TATCTGAAAC GATTGATATT TGCAATAATA 
    ATAGTACGAT TTTTTTTTTG AAATATTATG AAAACCTACA AAACCCCCAA 
    TTTTGGGGTA AGCCAAAACC GTAAATAAAG ACAAATTTAA CTCGAGTCCC 
    ATGCAAGGTT GTATATGGTA TACAATACAT CAATAACCTA TTTAAACTTT 
    GTAAAAATAG AAAAAATGAT TTTTTGGGTT TACGCTATCG TTCCCTTTTT 
    TCTATTTAAC ATGGGCTTTT TTACGGAAAG ATCGAAGCCC CAAATTTCCG 
    GAAAAACCGA AGCCCCAAAT ATAGCCTTTA ATTTAGCCAA AAAATGACAT 
    GCATTTTAAG TTCTTAACAC AAGCAAAGCC TGGAATTCCA TATAATTTCC 
    TTTATTCCGC TTATCCATTA TTATATGGTT ACTGGGACCA TTTACCTTGA 
    TTTGTTACAC AAACCATGAC CCATGCAAGA TTCAAATACA ACTTAAAGTT 
    TGATCAAAGG GTCCCC

AT1G47530.1

Model type
Protein coding
Short Description
MATE efflux family protein
Computational Description
MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: root hair specific 2 (TAIR:AT1G12950.1); Has 9964 Blast hits to 9893 proteins in 2013 species: Archae - 182; Bacteria - 7111; Metazoa - 140; Fungi - 326; Plants - 1355; Viruses - 0; Other Eukaryotes - 850 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G47540.2

Model type
Protein coding
Short Description
Scorpion toxin-like knottin superfamily protein
Computational Description
Scorpion toxin-like knottin superfamily protein; FUNCTIONS IN: ion channel inhibitor activity; INVOLVED IN: defense response; LOCATED IN: endomembrane system, extracellular region; CONTAINS InterPro DOMAIN/s: Scorpion long chain toxin (InterPro:IPR002061), Knottin (InterPro:IPR003614); BEST Arabidopsis thaliana protein match is: trypsin inhibitor protein 2 (TAIR:AT2G43520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G10690.1

Model type
Protein coding
Short Description
pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein
Computational Description
pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G12775.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G10695.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G10695.2

Model type
Protein coding
Computational Description
unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages.
Link
InterPro Scan - TAIR