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GT14600

CSHL Arabidopsis genetrap mutant lines

Original: GT14600

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14600

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4776023 [Map]; Strand: c
      • AT5G14770.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -326; Region: promoter
      • AT5G14780.1 - [+] show detail - formate dehydrogenase
        Distance: -920; Region: promoter
    Flanking Genome Sequence: GT14600 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAATTTCG GAGATAGATT 
    AATAATGGGT TAAGTTGCAA ATTACTCACT TTTCTAAACT TAATTAGAAA 
    AGTAGTCACT TTACTATTCA TAATTTGCAA AATAGTCACT TTTCTCTGTT 
    TGATTCGTAC ACTTAGATTG TACACCACTT TTAATGTACA GATGTATATA 
    AAAAATACAC AGCATACACT TTACATTTGT ACACTAAAAG TGATGTACAA 
    TCCAAGTGTA CGAATCAAAC AGTGAAAAGT GACTACTTTG CAAATTATGA 
    ATAGTAAAGT GACTACTTTC CTAATTAAGT TTGAAAAAGT GAGTATTTTG 
    CCAATACACC CATTAATAAT AATGCGATGC TATTTCACGA CGTACTTATC 
    CAAAACATAT AACGTTAACA AACAACTAAA GGGACCACTA TCATTATTGC 
    ATTTTAGATG TTAGTATAAA TTGAATTATT ATTATATTTG TTGGAAATTT 
    ATGTAAATAC ATATGTATTT AATATTTATC ACCTGTTAGA AAATATGTTA 
    AAAAAGGATT TGATTTATTT TTTGTTGAAG AAGAAACATG ATTTCTAAAA 
    TATTTGGAAA TCTTTGATTC TGGTTTATAC ACTTTGTATC AATGGAAATT 
    TGGTAAAATT GGATTTGTCA GTGTGAAAAT ATCATGGAGA GGAATCAATT 
    AAAAAGGAAA AGAACCTTAC CAAAAAGAAA GAAAGTAAAA GAATATAACT 
    AAATAGACAT TACAGTCAGC TT

AT5G14770.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 76339 Blast hits to 14879 proteins in 308 species: Archae - 3; Bacteria - 87; Metazoa - 1237; Fungi - 1442; Plants - 70832; Viruses - 0; Other Eukaryotes - 2738 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G14780.1

Model type
Protein coding
Short Description
formate dehydrogenase
Curator Summary
Encodes a NAD-dependent formate dehydrogenase.
Computational Description
formate dehydrogenase (FDH); FUNCTIONS IN: NAD or NADH binding, binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, catalytic activity, cofactor binding; INVOLVED IN: response to cadmium ion, response to wounding; LOCATED IN: thylakoid, mitochondrion, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT1G17745.1); Has 28984 Blast hits to 28977 proteins in 2707 species: Archae - 468; Bacteria - 17844; Metazoa - 730; Fungi - 1196; Plants - 566; Viruses - 5; Other Eukaryotes - 8175 (source: NCBI BLink).
Link
InterPro Scan - TAIR