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GT14607

CSHL Arabidopsis genetrap mutant lines

Original: GT14607

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14607

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2932906 [Map]; Strand: c
      • AT3G09550.1 - [+] show detail - Ankyrin repeat family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT14607 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GTCCGTTACT TATTGCTTGA 
    GCATGAACCT CAATTGAGTA AAACAGTAGC TCAATCAAAC GCAACCCCAC 
    TTGTGTCGGC TGCAACTCGA GGGCATTCAG AAGTTGTCAA TGAATTGCTT 
    GCTAAAGACT CAAGCTTGCT TGAGATTTCA AGATCGAATG GAAAAAACGC 
    GCTTCACCTT GCTGCGCGCC AAGGTCATGT AGATATTGTA AGAACCTTGC 
    TTGATAAAGA TCCGCAGTTA GCAAGACGAA CAGACAAGAA AGGACAGACG 
    TCTTTGCATA TGGCTGTGAA AGGAGTTAGC TCACAAGTCG TGAGGTTGCT 
    CCTTCGAGCT GATCCGGCTA TTGTCATGCT TCCTGATAAA TTTGGTAACA 
    CCGTGTTGCA TATTGCTACA CGAAAGAAAA GAGCAGAGGT AATGATTGAT 
    CTGCTCTTTA TTGAATTTTT GATTCTTGAT TCTTATATTC TTGTTTTGAT 
    TCACAGATTG TGAATGAGCT GTTACAACTT CCGGATACAA ACGTGAATGC 
    GCTAACAAGA GACCATAAAA CCGCATACGA CATCGCTGAA GGACTCACTC 
    ATTCAGAGGA AACGGCAGAG ATCAAAGAGA TATTATCGCG TTGCGGTGCA 
    CTTAAAGCCA ACGAACTAAA CCAGCCAAGA GACGAGCTGA GAAAAACCGT 
    GACTGAGATC AAGAAAGACG TTCACACTCA GCTGGAACAA A

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1734173 [Map]; Strand: w
      • AT3G05820.1 - [+] show detail - invertase H
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: GT14607 - 5-prime edge 
    CCTACTTTAT CCCTACTCAC GAGAAGACCG TAGAGCGGAA TAGAACAAAG 
    CCTGTGCCAA CAGAACCGTC ATGGCATGTT AGTCAAACTT TTCTTTTTAA 
    AGATTATAAG TAAGAAAACC TTATATTTGC GAGTTACTTG GATCTCAAGA 
    GGGTGACCGT GGATACCCAT ACGTCGATCT ATCATACAAG AGCCATCAGT 
    GACCAACAGG GTGGGAAACA TATCAAACCC ATCTGCTAAA CACAGGTTTG 
    CAATCATCTT TATCCCTGTC TGCACATCTA TCCTCTCTTG AAGCGAGTAA 
    TCTCCTGTGA TTTTCCCGTA TGCCCTCAAC AAGATTATCC ACCATAAACC 
    TGAAAATTTT CTATTTAGAC CAGCATGTGT GAATTAAACT GTTCAATTAT 
    ATGTTCCAAG CTGAAAGAAT CAACAATTAT GTATGACAAT GAATCAACAA 
    TTCAATCTTT TCTTACTCTA TTTATGGAAA ATGCAGATTG AAGAAGCAGA 
    AAAGTACTGA CCAGAATCAA CGGGAGCAAC ACGACCTATA GCTGCTTCGC 
    CAAAATCTGG ATCCAGAACC TCTTCGAACT TGTCCTCTTC AAGCGGTAAA 
    GTTCTGACTT TGAAACTCGC AGGCATTAAC CCTTGTCCTG GACTATAACA 
    ATCAACTGTT TTCTCCCCAC TCTGGAACCA CAACACAGAC AACAACACTA 
    ATTTTCATAT CTTTGATTTT ACTTAAATGT TTAACTTGCA GAAAAA

AT3G05820.1

Model type
Protein coding
Short Description
invertase H
Curator Summary
Encodes a putative plastid-targeted alkaline/neutral invertase.
Computational Description
invertase H (INVH); FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Plant neutral invertase family protein (TAIR:AT1G56560.1); Has 687 Blast hits to 684 proteins in 100 species: Archae - 0; Bacteria - 137; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09550.1

Model type
Protein coding
Short Description
Ankyrin repeat family protein
Computational Description
Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G12360.1); Has 55803 Blast hits to 24932 proteins in 1099 species: Archae - 58; Bacteria - 5470; Metazoa - 27318; Fungi - 5824; Plants - 4263; Viruses - 331; Other Eukaryotes - 12539 (source: NCBI BLink).
Link
InterPro Scan - TAIR