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GT14608

CSHL Arabidopsis genetrap mutant lines

Original: GT14608

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14608

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1417376 [Map]; Strand: c
      • AT2G04170.1 - [+] show detail - TRAF-like family protein
        Distance: 0; Region: exon6 (3UTR)
      • AT2G04170.2 - [+] show detail - TRAF-like family protein
        Distance: 0; Region: exon7 (3UTR)
      • AT2G04170.3 - [+] show detail - TRAF-like family protein
        Distance: 0; Region: exon7 (3UTR)
      • AT2G04170.4 - [+] show detail - TRAF-like family protein
        Distance: 0; Region: exon6 (3UTR)
    Flanking Genome Sequence: GT14608 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTATTGAT 
    CGATGACAGA AAAGTAGAGA ATAGAGATAT TTAAATGGGA ACAATGTTGG 
    TCACAGAGAC CTTCACCATT TCAGCTTCAA AGATAATGGA ATCATTCACC 
    GAATACCCTT TCGATGCATC ATTGAATTCT GCTAACGATA TGATAGTGTT 
    AACTCCCACA CCATAATCGC TTCGAGTAGG GTACCAAGCT GCAGCTGCAA 
    AACAAGAAAC AAAAAACAAC TTATATCAAC TATTAACTTT ATTCAAACAC 
    TCGTGGACAT TAACATGTTT TACTTATTAT TTTTGGTTAG TACTTACAAT 
    ATATTTGTGC GTGGTTGGAG CTTCGTTGAT TCTTTAACCG CAGATTAACC 
    GCTCCCCAAG TGTTTGTAGC AACTGCGTTT GGCTTATGGC CTTGAGCATA 
    TAGGAAGATT GGGATCGCTT GTGATCTTCC ATCACCAGTA CCTTTTGGGT 
    TAAATCCTAA TCTCCTGATT ATACATCAAC CAAAAACCGT TATTATACTT 
    GACCACGGCA AAAAAATTCA CATAATGGGT GCAATCTT

AT2G04170.1

Model type
Protein coding
Short Description
TRAF-like family protein
Computational Description
TRAF-like family protein; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT5G26280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G04170.2

Model type
Protein coding
Short Description
TRAF-like family protein
Computational Description
TRAF-like family protein; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT5G26280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G04170.3

Model type
Protein coding
Short Description
TRAF-like family protein
Computational Description
TRAF-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT5G26280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G04170.4

Model type
Protein coding
Short Description
TRAF-like family protein
Computational Description
TRAF-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT5G26280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR