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GT14626

CSHL Arabidopsis genetrap mutant lines

Original: GT14626

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14626

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24620319 [Map]; Strand: c
      • AT5G61200.3 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: intron1 (5UTR)
      • AT5G61200.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:...
        Distance: -565; Region: promoter
      • AT5G61200.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -565; Region: promoter
    Flanking Genome Sequence: GT14626 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAATTACTC TTCACCGGCC 
    AGGTAAAGCT TTCCTACGAC TATGCTTGTG TTCGTCGGAA TGTGTTTTTC 
    TTTCTTTTTC TTATAGTCTC TGGTCGCTAA TGACTCGTAT TCTTGGTCCA 
    GTTTTCAGCT CTTGTGTGTA AATTTGTTAG TCTTTTTTAA TGTCGAGTAA 
    TTGGGGAAGT AGCTCGCGAG ATAGCTCGGG AAGTAGTTCA AGAAGCGATG 
    TTGACAACTC GTTTGATGCT GACGAACTTT TACAGATTG

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24620250 [Map]; Strand: c
      • AT5G61200.3 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: exon1 (5UTR)
      • AT5G61200.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:...
        Distance: -634; Region: promoter
      • AT5G61200.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -634; Region: promoter
    Flanking Genome Sequence: GT14626 - 5-prime edge 
    ATTTCCATCC TACTTTCTCC CTATTCCGAC GACATACTTG AACTGAATTT 
    TCCAGTTTCC TTTTTATCTG CTTTAATTTA AACAAGAGAA GGAAGATCCG 
    GATGGGTCGG GCCGGGTCGG ATAAGTAATC AGGGTGGCCC AGTTGAGCTG 
    TAGTCGTAAA GCAAATAATG CAATTTTTGA TGATTACATT ACAGACTAAG 
    CCGAAAATTC TGTTGGAAAA ACCGGTCGTT ATTTCCCAAT TTATTGAGAG 
    AACCTATATA CTACAATGCC TAAATTTTAT AGTTCTTGAA TCTTTTTTAA 
    GAGGTAAAGT TTATATATAA GAAACAACAG TAAGAAATAA GCAAAAGCCA 
    ATCCAAAATA AAACGTTAAT CTGCCATTCA AAAGAAAACA TCCATTGTTG 
    ACAACTTAAA CATGAATTAA CAATTCACAT TATTTTAATA TTTTTTCCCC 
    CAAAGGCGAG TCCAAAAGTT ATCAGCTTGG CCCTTAATCT CTTCCCTTTT 
    GGCAGCCTCT CCAGGAAGAT CCTTGCGTCC TCCAGACTTG TTTTCGGCTT 
    CCTGTGCTTT TGGTTCGGGT TTATGCTTCT GCTCATCTTC CAAATTCTTG 
    GCCACATTCA CGTTTGGTGG CAGTTTTACT CTCTCAGGAA TCACATCTAA 
    ACATCC

AT5G61200.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G07890.2); Has 22208 Blast hits to 14344 proteins in 1121 species: Archae - 324; Bacteria - 1921; Metazoa - 12512; Fungi - 1464; Plants - 1009; Viruses - 53; Other Eukaryotes - 4925 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G61200.2

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G07890.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G61200.3

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G07890.3).
Link
InterPro Scan - TAIR