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GT14642

CSHL Arabidopsis genetrap mutant lines

Original: GT14642

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14642

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1933238 [Map]; Strand: c
      • AT3G06370.1 - [+] show detail - sodium hydrogen exchanger 4
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT14642 - 5-prime edge 
    ACTTTCTCCC TGCTTAGAAA ATTCTAAATT TGGATTACGC AAAAATAGGG 
    TTCGTGTACT GGGATTGTGA TCTTGCTTAT AAGTGGAGGC AAAAGCTCAA 
    GGATTCTTGT GTTTAGTGAA GATCTCTTCT TTATTTATCT TCTTCCACCA 
    ATTATATTCA ACGCAGGGTA AGTTCTTTTT ATATAGAATT TCATGATAAA 
    ATCGGTTATC GAAAGTCGGA ATTGAGTAAC ACATTTTTTT GTTACAGGTT 
    TCAGGTTAAG AAGAAGCAAT TTTTTCGCAA CTTCATGACC ATTATGTTAT 
    TTGGGGCTAT TGGAACTCTC ATTTCATTTG TTATCATCTC ATTTGGTAAA 
    AAACCAATCT CAATCAACTC CCACATTTCA ATATCATGAG TCTCATATAT 
    TTTGATGATG TTTCCGGTTT TGTTTTTGTT ATGGCTAGGT GCTAAACATC 
    TTTTCGAGAA AATGAATATC GGTGATCTTA CCATTGCGGA CTATCTAGGT 
    ACCCTGAAAC AAAGAAAACC CTTTTCAAGT TCTTATTCAT TAAGTCTCAT 
    ACTGTTTAAA TCTGTACTGA TGATTTTGCA GCCATTGGAG CAATATTCTC 
    TGCTACAGAC TCTGTTTGCA CCTTGCAAGT AAGAACTTTT TTTCTGAGAC 
    ATTCAAAGAT ATTATTCTAC TACATTTTTC TAATCAAAAA TTAACTTGCA 
    CGCTT

AT3G06370.1

Model type
Protein coding
Short Description
sodium hydrogen exchanger 4
Curator Summary
member of Sodium proton exchanger family
Computational Description
sodium hydrogen exchanger 4 (NHX4); FUNCTIONS IN: sodium:hydrogen antiporter activity, sodium ion transmembrane transporter activity; INVOLVED IN: response to salt stress, sodium ion transport; LOCATED IN: vacuolar membrane, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Na+/H+ exchanger, subfamily (InterPro:IPR004709), Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Na+/H+ exchanger, isoforms 1-4, conserved region (InterPro:IPR018407); BEST Arabidopsis thaliana protein match is: sodium hydrogen exchanger 2 (TAIR:AT3G05030.1); Has 5892 Blast hits to 5885 proteins in 1663 species: Archae - 61; Bacteria - 4002; Metazoa - 840; Fungi - 131; Plants - 419; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink).
Link
InterPro Scan - TAIR