1. Home
  2. Mutant Lines
  3. GT14649

GT14649

CSHL Arabidopsis genetrap mutant lines

Original: GT14649

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14649

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3500536 [Map]; Strand: w
      • AT3G11170.1 - [+] show detail - fatty acid desaturase 7
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT14649 - 5-prime edge
    ACCCTAACCT TGTTCTCGCC TCCGCCTCAG CCTCCGTCAC CCTTAGACTT 
    GGACAAGTTC GACTGAGGCT GATTCCCCAG ACCCACTCGA AGGACTTGGT
    CTTTATCCCT ATCACTACAA ATAGGATTAG GACGTAATTG GACTCTCAGG
    GAAGAAGTTG TCATTATCAT CATACTCATC ATGGTGCAAG AACACCAACC
    TAAATGGCAA CTGGTTGTTG GATTTGCAAC TGCGGAATCT GCTTTGAATT
    GAGAACAAAA ATATTGATTT ATGTCGATTA CATGGCAGTG GACATGGCAC
    TTACGCAAAT GATCCGAACA TGAAGAGCGG GGACCGTCAT CTTCCTCAAT
    CCCCGGTTCC GGACCCAGAC CGTGGATGGT GAGTTTT

AT3G11170.1

Model type
Protein coding
Short Description
fatty acid desaturase 7
Curator Summary
Chloroplastic enzyme responsible for the synthesis of 16:3 and 18:3 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene expression is induced by wounding in shoot and root. The wound-response in shoot is independent of jasmonic acid mediated pathway whereas the root response is mediated by jasmonic acid.
Computational Description
fatty acid desaturase 7 (FAD7); FUNCTIONS IN: omega-3 fatty acid desaturase activity; INVOLVED IN: response to cold, response to wounding, fatty acid biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: plastid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 8 (TAIR:AT5G05580.1); Has 2938 Blast hits to 2935 proteins in 698 species: Archae - 0; Bacteria - 1234; Metazoa - 17; Fungi - 265; Plants - 926; Viruses - 0; Other Eukaryotes - 496 (source: NCBI BLink).
Link
InterPro Scan - TAIR