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GT14733

CSHL Arabidopsis genetrap mutant lines

Original: GT14733

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14733

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4840201 [Map]; Strand: w
      • AT1G14140.1 - [+] show detail - Mitochondrial substrate carrier family protein
        Distance: -568; Region: promoter
      • AT1G14150.1 - [+] show detail - PsbQ-like 2
        Distance: 0; Region: exon1 (CDS)
      • AT1G14150.2 - [+] show detail - PsbQ-like 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14733 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC ATGTGGTCCA 
    ACATCTCCCT CATGTCTCTT AATCCTTCAG CCGTCTGTTT TATACGCGCC 
    GCCGCATCCT CAGGTGATAG TCCCGGCATA AAATATTTCT CCTTTATGAA 
    TGACCTTGTC CCCCATTTCT CCTGTGCTAA TGCTGATGAC GTAGCACCGC 
    CGATGACCGT GAATGTTATT AGTGAAGTCA AGGTTCTCCG GCGGGTGAAG 
    ATGTCTTGTT GGGGTTCTCC GGTGCAACAT ACGACGGAGA ACGGTTGGTT 
    TACACGGCGA TGATAAATTT TCCGGAGGAG ATACGGTGGC GGAGTGTTGG 
    TGGTGGTGAA GGAGCTCATT TGATTTTTGT TTTTGTTTTT CTTAAGGATA 
    TGAAATGGGA GGAGCTCAAA ACTATAATGT CTACTCGGTC TTTCATGTTT 
    TGCCACGTCG GCTGTTATCT CTAAAGTTTT GTATTTTAGA ATTTGTGAAC 
    ATGGGCCCAT AAGACTTTAA AGCCCAATAT TATGGAAACG ACGTCTCAAA 
    TACACTCTGA TGACCGAAAC GATGTCGTTG ACTACGAAAT AGAATCAAGT 
    TGTGTTCTCT GTGATGGACA TTGTGTTAGT GGTAATCAAA TCCGGTGAAA 
    ATGGAGCGGA GCCGAGTGAC CAGAGAAGCA CCGACCGGAA CCAGGATCCT 
    GCTTGCTTCA CTCTCTGCGA TGGTTGC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4840326 [Map]; Strand: w
      • AT1G14140.1 - [+] show detail - Mitochondrial substrate carrier family protein
        Distance: -693; Region: promoter
      • AT1G14150.1 - [+] show detail - PsbQ-like 2
        Distance: 0; Region: exon1 (CDS)
      • AT1G14150.2 - [+] show detail - PsbQ-like 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14733 - 5-prime edge 
    CTTATCTGTC TCAGGATCTC ACCAACGCCA TGAACATCTT GCCGGAGAGT 
    CGCCGGAATG ATTACGTTCA GGCGGCAAAC GAGCTTGTCG AAAACATGAG 
    TGAGGTATAC GTTATATAAT TAATGAACAA ATTAAAAACA GAATTAGTAA 
    TTTTTAATGC TAATTTAAGG TTTGATTGTT AATAACACTG AATGTTGCGT 
    TTTGTAACAC ATGATCATAT GGAAGTCAAA CTTTAACCAC ATGTTAATAT 
    TGATATCTTT CATAATTTTG ATATAACAGT TGGATTTCTA TGTACGGACG 
    CCAAAGGTGT ACGAGTCCTA TCTTTACTAC GAGAAGACAT TGAAATCGAT 
    AGACAATGTT GTGGAGTTTC TTGCTTAATT CAGTTGTATT GTATATATGT 
    CTTTCTTCAT TCTTCACATG AAATCTCTGG ACTCGTTACA TTAGATATAA 
    AATTAAAAGA CTTAATAATG TATATTCAAG AAACATTTCG TTTGCGTGAT 
    TTCTCTGCAA AATCAGATCG ATATATATAT GTGCATAGAT ATCTTAGTGG 
    CGAGAGAGGG AGATAGCGGA ATTGATAACA ATAAGCATGA GTAAGATCAC 
    TGCGCAGAAA GAACCGATGA GAGA

AT1G14140.1

Model type
Protein coding
Short Description
Mitochondrial substrate carrier family protein
Computational Description
Mitochondrial substrate carrier family protein; FUNCTIONS IN: transporter activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: uncoupling protein 2 (TAIR:AT5G58970.1); Has 28913 Blast hits to 14062 proteins in 461 species: Archae - 0; Bacteria - 4; Metazoa - 12057; Fungi - 8822; Plants - 5230; Viruses - 3; Other Eukaryotes - 2797 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14150.1

Model type
Protein coding
Short Description
PsbQ-like 2
Curator Summary
Encodes a subunit of the NAD(P)H dehydrogenase complex located in the chloroplast thylakoid lumen.
Computational Description
PsbQ-like 2 (PQL2); FUNCTIONS IN: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthetic electron transport chain; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: photosystem II subunit Q-2 (TAIR:AT4G05180.1); Has 142 Blast hits to 142 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14150.2

Model type
Protein coding
Short Description
PsbQ-like 2
Curator Summary
Encodes a subunit of the NAD(P)H dehydrogenase complex located in the chloroplast thylakoid lumen.
Computational Description
PsbQ-like 2 (PQL2); FUNCTIONS IN: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthetic electron transport chain; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: PsbQ-like 1 (TAIR:AT3G01440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR