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GT14771

CSHL Arabidopsis genetrap mutant lines

Original: GT14771

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14771

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3565072 [Map]; Strand: w
      • AT3G11380.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT14771 - 3-prime edge 
    TCCATCCTAC TTTATCCCTG CCACTCATTG TTTTATATCT TCTCTGCTCC 
    TTTGGTATTT CAAGCTTCAA GAGAGAACCA ATCAAAGTTC GAAATTCTTC 
    ATTATCCTTC TGTCTTGTCG CCTTGTACTT GTCCTATACA CGGTGAACAT 
    CTTCTATCTC TCCGGCTTCA CCATATAGGC TCATGAGTTC CTTATAGTCA 
    TGACCCAACC ATTCCTCTGT TTCTTGAAGC ATCCTCCTAG CCTTTTGTTT 
    AGAACCGTCT CTCACATAAG CCTTTGCCAT CACAAGCATT GTGAGCCCAT 
    CAAGCCTTGG AGTCTCTTTC CTATCAGCTA GAAACTTGTC CATTGTCGC

AT3G11380.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G28020.1); Has 4044 Blast hits to 2539 proteins in 107 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 2; Plants - 3964; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Link
InterPro Scan - TAIR