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GT14778

CSHL Arabidopsis genetrap mutant lines

Original: GT14778

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14778

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2129897 [Map]; Strand: w
      • AT3G06750.1 - [+] show detail - hydroxyproline-rich glycoprotein family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14778 - 3-prime edge 
    GAGTATTTTA CCGACCGTTA CCGACCGTTT TCATCCCTAA TTACGGGACA 
    CCACCACCAC CGAATCCGAT CGTTCCTTAT TTTCCGTTTT ACTATCATAC 
    TCCTCCTCAG GGATATTCAG GCTCGGCTCG TTTACAGAAT TCTCTCCTCT 
    TTGCTCTGTT CGCCGTCTTG CTCTGTTTTG TGTGACGGCG ATTCATCTGT 
    ATTTGGCCGG GAAAAGTGTA CGGTGTAAAA CTGAAATATC TTGTTTACTT 
    ATTTAACTTT TTTTACATTT TTGTTGACAA TTTGTATTTA TTATATCTTT 
    TCAATTAATT AAGAACATTT ATAACTACTC GTTGTGTTAG AAATGTTATT 
    GCTCTCATAT CTTCTTCAAT ATATATATCC ACAAGATGGA CATTAACATA 
    ATTAATTACA TGAAACTGAG CTTCAGTGAA AAAAAAAATT CTA

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2130086 [Map]; Strand: w
      • AT3G06750.1 - [+] show detail - hydroxyproline-rich glycoprotein family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14778 - 5-prime edge 
    TAAGATCCGC CGCCACCGGA GCTTGATGGC GGAGGAGGAG GAGGAGAGTA 
    AGAAGATGGG ACAGGATTAC ATGGATTGTC GCAAGAGGAA CACATTGTGC 
    AAGAAACAGT TTCGTCCTTT GAAGTCACTA AAAGAGGCAG TGACATTAAG 
    AGAATAAGAA GACCTGACAA ATTAGAGAAT CTGATTGCTT CCATTGTCAG 
    AAATTTGTTG TCTGACAAAT GAGCTAGAGA TTTGTACTAC CGTCCAGTGA 
    TGGGGAGGGA GAGAAGATGA AAGAAGAAAA GAGAGAGAGA AGAAGCACAT 
    TCAGAGGCTA GAATAAAAGT GTTCCTCTCT TTATTGACGA ATTCAAGATT 
    TTTAAATTAT TAAATTGTTT ATTGAAAAAT AATTATTTGT TTTCGTTATT 
    ATTAAAGATT TAAAGGTTAT GCCACAATTT GTTTT

AT3G06750.1

Model type
Protein coding
Short Description
hydroxyproline-rich glycoprotein family protein
Computational Description
hydroxyproline-rich glycoprotein family protein; Has 6317 Blast hits to 3436 proteins in 319 species: Archae - 0; Bacteria - 429; Metazoa - 2195; Fungi - 739; Plants - 2175; Viruses - 83; Other Eukaryotes - 696 (source: NCBI BLink).
Link
InterPro Scan - TAIR