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GT14783

CSHL Arabidopsis genetrap mutant lines

Original: GT14783

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14783

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 421567 [Map]; Strand: c
      • AT4G00970.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 41
        Distance: 0; Region: exon7 (CDS)
      • AT4G00975.1 - [+] show detail - other RNA
        Distance: -406; Region: promoter
    Flanking Genome Sequence: GT14783 - 5-prime edge 
    TCTGATTGGT GTATCTTATA ACTGATTCTC CATCTCCGGT GTAAAAAGCG 
    GGTTGCGAGG GTCTCGGTAA AGTGAAAGAA TTTGCATTGA GCATTACAAC 
    AACAGAAGCC ATTGTTGGTC TACTCTCTGC ATTATCCTGA ACACACAACA 
    AACCAATGTG AATGCATTTC ATGATTTCAT CACTGACACC TATTGTTTCA 
    ACGAAACTTG GATCCACAAT GTTTAACACT TCCCCTTCTC TCCAGCTCTT 
    CCATACCTAT ACGTATAAAA GACAATATAT GACTTTAAAT GAAGACAATA 
    AATGAGTCCT CAATTACAAC CCCAAACTCA AAGTCTAGAG TCAAAAAAAC 
    AAAACAAGAG TTTTATTCAC TTACATAGCT AAGGAGGAAT AATGAGCTGT 
    CTTCTTCTGG AGACCAGTTG TTTTTCTTAC CTTTAATAAT CTCCAGGACT 
    AGTACACCGA AGCTAAATAC ATCGGTTTTT ACCGAGAATT CGCCACTCAT 
    TGCATACTCG GGAGCCATGT AACCGCTGTA ACAACCAAAT AAGTTTCGGT 
    TTTCATTTTT GTTTTACAGA ACTGATAATA ACTTAAAGGG TAGTTTTTAA 
    AATGGTAGCT TACTAGGTTC CTGCAACTTT ACTTGTAAAC CTGGTCTGAC 
    TTGTTTGGTC AGTATCAAAC AACTTTGCCA TTCCAAAATC CGCTATTTTC 
    GGATTCATTG CAT

AT4G00970.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 41
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 41 (CRK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 29 (TAIR:AT4G21410.1); Has 118247 Blast hits to 116820 proteins in 4488 species: Archae - 94; Bacteria - 12773; Metazoa - 43795; Fungi - 10171; Plants - 33437; Viruses - 407; Other Eukaryotes - 17570 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00975.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT4G00980
Link
InterPro Scan - TAIR