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GT14785

CSHL Arabidopsis genetrap mutant lines

Original: GT14785

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14785

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11033296 [Map]; Strand: c
      • AT4G20460.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: -619; Region: promoter
      • AT4G20470.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: -542; Region: promoter
    Flanking Genome Sequence: GT14785 - 5-prime edge 
    TTTTACCGAC CGTTACCCAC CGTTTTCATC CCTAGTTGAT ATAACAATCA 
    TTGCAATCGC ACATCCTAAA AAACTAATTG AAATTAATAT CCATATAAGG 
    AAGAAACTCA TTAGTGTCGA CATGCATTGG AACAACGACT TTGTTTTTGT 
    TTGACTTTGT TTATAGTCAC GGTTTCTCAC TAATAGTTTC ATTCTCACCA 
    CCCCTAACAA TTTAGAAACA AGGCTGGTTT TGAATGACAT TCTCATGATA 
    AAACTAATGA AATCCGTGTA CATGTTTGGT TATTCCGTCT TTTATGAAAA 
    CGGATAAACA ATTCAAGAAG TCATATTAGT TAATGTAACA TCATCAGAAA 
    TTCCTAATGT TTTGACTTAG ATTGTAGTCA CATTTCTCAA TATTGAGTCA 
    TTTTGTTATC AAAACCTTCT TTATCTAGGC TACTCAACGA CATTTTAGTA 
    AAAAAATCTT TCACATTCAT TGTAAAAATA ATTTTTTTTT TAC

AT4G20460.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, UDP-glucose 4-epimerase activity, binding, catalytic activity; INVOLVED IN: galactose metabolic process, cellular metabolic process, nucleotide-sugar metabolic process, metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G30620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G20470.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR