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GT14837

CSHL Arabidopsis genetrap mutant lines

Original: GT14837

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14837

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9441470 [Map]; Strand: c
      • AT1G27180.1 - [+] show detail - disease resistance protein (TIR-NBS-LRR class), putative
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT14837 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAACAACGA GGGAATGCAA 
    CGACGGGATG AGATCGGTCC AAGTCTCGAC TTAGCTATGG ATGACTCAGC 
    GGCTTCCGTT ATATATCCAC TAACTACGCT AACTCTTCTT GGTGCCTAAA 
    TGAATTAGCT ATGCTCTGCG ATTTTAGATC ATCTCTGAAA CGTCCCGTCA 
    TACCTATCTT CTATGGAGTC AATCCCGAGG ATGTCCGCAA ACAGAGCGGT 
    GATTTCGCTA AGGATTTTGA AGAACACGCC AAAACATTTA GCGAGGTGGA 
    GATAAAACGA TGGAGGCGAG CTATGAATTT AGTCGGAAAT ATCCCTGGAT 
    TTCATCTCAC TCGA

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT14837 - 5-prime edge 
    CGGAAGACCC TGAGCTTTTG CTTCGCGGTG AGAGCGACCT AGAGAAGCTC 
    ACAGAAAATT TCGCGGGTGT CGAAGCCTCT GAAGCTGAGA AATACGTTGT 
    ACTTGAGCCT ATGCGGCAAA ACGCCATTCT CCATCTCAAA GCTTCCGATC 
    TCCTTCAATA AGTCAACGAA CTCTGTGCTC TTCGAAGAAC GCTTTCGGAT 
    TTTGGGAAGC TTTTCGATTT TTGGCTTTTG TTGACTAATA ATAAATGGTT 
    TCTTTCTCGA ACGCTGAAAC GCCACACAGT TCTATCTACG GTCAATTAGA 
    ACGACATGGA GGGTCGATTC CTTCACTCGT CTTTCTACTA CTCTTAAACT 
    TGGTTAATTT TAGTACCATA GACTCATAGT AGGAAATGAA AGGAAAAGAT 
    GGTTACATGA CTACATCATT ACTAATCTAT ATGCCAAAAA TATAATATTA 
    CTTGAAATGA AAAGATTATA AATTCAATAA TTAAGATTAG AGATGAGAGA 
    TTGAAGTCAT ACTCCTAAAT TAAACCGGAG AGATTT

AT1G27180.1

Model type
Protein coding
Short Description
disease resistance protein (TIR-NBS-LRR class), putative
Computational Description
disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: transmembrane receptors;ATP binding (TAIR:AT1G27170.1); Has 83534 Blast hits to 33450 proteins in 1183 species: Archae - 68; Bacteria - 4700; Metazoa - 16188; Fungi - 1127; Plants - 56869; Viruses - 12; Other Eukaryotes - 4570 (source: NCBI BLink).
Link
InterPro Scan - TAIR