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GT14878

CSHL Arabidopsis genetrap mutant lines

Original: GT14878

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14878

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 78894 [Map]; Strand: w
      • AT2G01080.1 - [+] show detail - Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT14878 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAAT 
    GAATGATCCT AGAAAAAATA TCAAAAGTGA AGGAGAAGCA AAGGCCATAA 
    GGAAAGCAGA GTGGGGACAG ACAAGAGCAT GACTAGTGGT GTAAGGAATC 
    TATTTAACTT AGCAACCACT TTTTTTTTTT TTCCCCCCTT TTTTTCCCCA 
    AAAAGGGGGG AATTTTTTTT GCAAAAAGGG TTCCCCCCGC CCGGGTTGGC 
    CCAAACCCTT AAAGGAAAAA AAGGGGGGGA AAAAAAAGGG GAAAAAAACC 
    CGACCCCCCG GGAAAACAAA ATTTGGGGCC GGAATTTTAC CCCCCCCCTC 
    CCCCGGAAGG GGGGGCCCCC CCCGGCCTTT AAAAGAAACC CCCTAAAAAA 
    AACCCGGGGG GGGGGTTTCA AAAAAAAAAC CCCCCCCCCA AAAAAAGGGG 
    CCCCCAAATT TTTTTAAAGG GGGGCACCCC GGGAAAAAAC CGGGCCCCCC 
    CCCCCCCCCC AGGGGAGGCC TTTTTTAAAA CACCGGAAAG GGGGCCCCCC

AT2G01080.1

Model type
Protein coding
Short Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Computational Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT2G27080.2); Has 675 Blast hits to 674 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 673; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR