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GT14888

CSHL Arabidopsis genetrap mutant lines

Original: GT14888

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14888

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 12817719 [Map]; Strand: c
      • AT2G30020.1 - [+] show detail - Protein phosphatase 2C family protein
        Distance: 1631; Region: intergenic
      • AT2G30032.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 173...
        Distance: 1810; Region: intergenic
    Flanking Genome Sequence: GT14888 - 3-prime edge 
    ATGAAACGGT AGAGGATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    GTTTTGCGTG TGGTCCCTCG TTTTTTTTAT TTAATACACT ATAGTTTTTT 
    TTTTTTTTTT TTTGGCAAAA AAAAAATTTT TTTTAAAGCC CTTTTTTTTT 
    TTTGGGAAAA TTTTTTTCCC GGGGGTTTTT CCAAAATTAG GGGGGACCCC 
    CAAAAAAAAT TTCCCTGAAA GGGGGGGGAA ATTTAAAATT CGGGAAAAAA 
    ATTCCCCCCC TTTTTTTGGT TCAAAGGGGG GGCCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 12817634 [Map]; Strand: c
      • AT2G30020.1 - [+] show detail - Protein phosphatase 2C family protein
        Distance: 1546; Region: intergenic
      • AT2G30032.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 173...
        Distance: 1895; Region: intergenic
    Flanking Genome Sequence: GT14888 - 5-prime edge 
    CTTTGAAAGA ATAGTAAATG CCAACCAATG GCCAGTTGTA GTGGACGAAC 
    TCTGTCTTAA TTACATCGTG AATATTTAAT TGCATGCGAG TGTGGTTTAT 
    AGTATTATTG ATATTTTCTT TGTTCATTTA GTTAATTATT ATGGGTTTGT 
    TAACAACTCT AATTCAACTA CTTCTTTTCA AGCTTTATTC CTCTTGGAAA 
    AAAA

AT2G30020.1

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Curator Summary
Encodes AP2C1. Belongs to the clade B of the PP2C-superfamily. Acts as a MAPK phosphatase that negatively regulates MPK4 and MPK6.
Computational Description
Protein phosphatase 2C family protein; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G07160.1); Has 6969 Blast hits to 6779 proteins in 496 species: Archae - 2; Bacteria - 405; Metazoa - 1770; Fungi - 794; Plants - 2680; Viruses - 9; Other Eukaryotes - 1309 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G30032.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR