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GT14895

CSHL Arabidopsis genetrap mutant lines

Original: GT14895

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14895

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12167825 [Map]; Strand: c
      • AT4G23250.1 - [+] show detail - kinases;protein kinases
        Distance: -799; Region: promoter
      • AT4G23260.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 18
        Distance: 0; Region: exon7 (CDS)
      • AT4G23260.2 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 18
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: GT14895 - 3-prime edge
    GTTACCGACC GTTTTCATCC CTATCTATGA GCTCATGCAA TGATTTGTTC 
    TCCCAAAGTT TCCAGACCTG TAAAATATAT ACACATTCAG AACTATAATC
    AGTGTTTTAA CTTTTAAGAG AATCAAAGAA AGTTTGGGAC TCACATATGT
    GACTAAATTG TTAACTAAGC CATCCATCTG GGAGAAGCTG CTATTCTTTT
    TGCCACTAAT GATCTCAAGG ATCAATACTC CAAAACTATA GACTTCTGAT
    TTCATTGAAA ATTGG
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12167746 [Map]; Strand: c
      • AT4G23250.1 - [+] show detail - kinases;protein kinases
        Distance: -720; Region: promoter
      • AT4G23260.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 18
        Distance: 0; Region: exon7 (CDS)
      • AT4G23260.2 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 18
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: GT14895 - 5-prime edge
    CCTACTTTCT CCCTGCTCTA GATCCCTTTA TCACCAAGAT TTCACAAGCG 
    AGGAAGTCAT TAGATACATT CATATTGGGC TGTTATGTGT TCAAGAAAAT
    CCTGCAGATC GACCAACAAT GTCTACGATT CACCAAATGC TCACAAACAG
    CTCAATCACT CTGCCTGTGC CTCTGCCTCC TGGATTTTTC TTTAGGAACG
    GACCAGGATC GAACCCGGGT CAGTCGAACA GCAAGTCTTT TGCTTGTTCT
    GTAGATGAAG CATCAATCAC GGACGTTAAT CCTCGTTGAA AATTCAGCAT
    TTGGTTTTTT CTTGTTTCCA CAAACCTCTA TCG

AT4G23250.1

Model type
Protein coding
Short Description
kinases;protein kinases
Computational Description
EMBRYO DEFECTIVE 1290 (EMB1290); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid autophosphorylation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 18 (TAIR:AT4G23260.1); Has 121653 Blast hits to 119053 proteins in 4422 species: Archae - 98; Bacteria - 13672; Metazoa - 43987; Fungi - 10320; Plants - 35330; Viruses - 426; Other Eukaryotes - 17820 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G23260.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 18
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 18 (CRK18); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: kinases;protein kinases (TAIR:AT4G23250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G23260.2

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 18
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 18 (CRK18); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: kinases;protein kinases (TAIR:AT4G23250.1).
Link
InterPro Scan - TAIR