1. Home
  2. Mutant Lines
  3. GT14924

GT14924

CSHL Arabidopsis genetrap mutant lines

Original: GT14924

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14924

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 2219054 [Map]; Strand: w
      • AT2G05812.1 - [+] show detail
        Distance: 1904; Region: intergenic
      • AT2G05820.1 - [+] show detail - transposable element gene
        Distance: 1241; Region: intergenic
    Flanking Genome Sequence: GT14924 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTACCTCA 
    GGGTCTCCTC ACTGCGGACC TATTTTTTAT TAAATACAAT ATTGATTATG 
    TTACTTAGAC TTTCCTTTTA TATGCTATTG TTTTGTTTGA TTTAAGAAAA 
    TATTATATTA TAGGGCACTT TTATAAAACA TATTACACGT TTAGCCACTT 
    TCCAAAAAGT AGGCACTTTG TATAAATAAA TTTACCTATT TACCCTTCTC 
    TTAATTATTT CTTTCTCCTT ATAATATTTT TCTCTCTCCT AGTTTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16194433 [Map]; Strand: w
      • AT3G44620.1 - [+] show detail - protein tyrosine phosphatases;protein tyrosine phosphatases
        Distance: 0; Region: intron1 (CDS)
      • AT3G44620.2 - [+] show detail - protein tyrosine phosphatases;protein tyrosine phosphatases
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT14924 - 5-prime edge 
    CTTTCTCCCT GCCCTGAGGT TTGGTTTTGG TGTTAGGGTT TTTTGGTGGA 
    TGTAATTTTG TCGGAATACA GAGTTATGGA AACTTTGATG TGAAACTGCT 
    CTTCTTACTA GGGCAGATCA AAAACAGTAA TCTATTTTTA TGGTGATTGA 
    TGTTTTAATT GGAACAATTA GTGGTTGTAA ATTAGGAGCA GAGGAGACTT 
    TGAAATTGAT GTTTTCTGAT TCAGTTTTTG ATTTGTGAAA ATGTTGGTTT 
    TTTAAAAGGG GAATATGGCG GATCCAAGAA TGAGAAGTGC TGCGAAACGT 
    CGCGGGGTTG AGATAACATC ATTATCAAGG TCGATCAAGG CATCTGATTT 
    CAGAGAGTTT GATCTCATTC TTGCAATGGA TGAACAAAAC AAAGGTAGAA 
    CAAATAGTAA TTTATTCAAA GTTATATAGA GGAATCGTGA GATTAGATCT 
    GATTATTTAT GAGTTTGAAT GTTTAATGTT TGCAGAGGAT ATATTGAAGG 
    CTTACAGTGT CTGGAAGGTT AAGCTAATGT GTTCTTATTG CAAGAAACAC 
    AATGACAAGT TTGTTCCTGA TCCATATTAT GGTGGAGCTC AAGGTTTTGA 
    GAAGGTAATT ACCATAGAGA TTGATGAAGC TGAATGTGGA TATTAATTTT 
    TGGTTTATAC AGATGCTACC TATAAAATTT CAGCTATGCT TAGTATTGGC 
    ATTA

AT2G05812.1

Model type
Other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT2G05810
Link
InterPro Scan - TAIR

AT2G05820.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
CACTA-like transposase family (Tnp2/En/Spm), has a 6.4e-71 P-value blast match to gb|AAG52024.1|AC022456_5 Tam1-homologous transposon protein TNP2, putative; 12762-16371 (Arabidopsis thaliana) (CACTA-element)
Link
InterPro Scan - TAIR

AT3G44620.1

Model type
Protein coding
Short Description
protein tyrosine phosphatases;protein tyrosine phosphatases
Computational Description
protein tyrosine phosphatases;protein tyrosine phosphatases; FUNCTIONS IN: protein tyrosine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase/arsenate reductase (InterPro:IPR000106), Protein-tyrosine phosphatase, low molecular weight (InterPro:IPR017867); Has 5215 Blast hits to 5214 proteins in 1894 species: Archae - 4; Bacteria - 4223; Metazoa - 305; Fungi - 139; Plants - 47; Viruses - 0; Other Eukaryotes - 497 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G44620.2

Model type
Protein coding
Short Description
protein tyrosine phosphatases;protein tyrosine phosphatases
Computational Description
protein tyrosine phosphatases;protein tyrosine phosphatases; FUNCTIONS IN: protein tyrosine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase/arsenate reductase (InterPro:IPR000106), Protein-tyrosine phosphatase, low molecular weight (InterPro:IPR017867).
Link
InterPro Scan - TAIR