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GT14939

CSHL Arabidopsis genetrap mutant lines

Original: GT14939

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT14939

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 610928 [Map]; Strand: w
      • AT2G02310.1 - [+] show detail - phloem protein 2-B6
        Distance: -798; Region: promoter
      • AT2G02320.1 - [+] show detail - phloem protein 2-B7
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT14939 - 5-prime edge
    TTCTATGGCT ACATACGCAA AGCCATAACA TATATCCGCT TTCATGAACA 
    CAATGTAAAC CGAGTAACGA GTTCTTGGAG ATAGAAAACG AGTATTCGTT
    CTGCATCGAA TCTCGAACCA ACGTGTTGTG AGAAGCTCTG GTACTGTTTC
    CAACCTACAC TGAGCAACAT TTTTTATCAT TATCGTCATC TTTGGAACCA
    TGTCATTACA ACCGAACTAA AAAAAAATCA TGAAAAATTG GTACCAAGGT
    GATAGAGGGT TTGTAATCCA TTTCCAAGTG TGATGAACGG AAAGGTTCAA
    AGCTGAAGCT GATAACATCA TACACCTCTT CCCAGTCGGC TTTTCTATCC
    ACAAGACCTA ATTTTGGAAT AAACCAAAAT AATCATTGAT TTATTATG

AT2G02310.1

Model type
Protein coding
Short Description
phloem protein 2-B6
Computational Description
phloem protein 2-B6 (PP2-B6); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, sperm cell, root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B2 (TAIR:AT2G02250.1); Has 502 Blast hits to 484 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 498; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02320.1

Model type
Protein coding
Short Description
phloem protein 2-B7
Computational Description
phloem protein 2-B7 (PP2-B7); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B8 (TAIR:AT2G02340.1); Has 490 Blast hits to 475 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR