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Mutant Lines
GT14987

GT14987

CSHL Arabidopsis genetrap mutant lines

Original: GT14987

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14987

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 1; Position: 7441603 [Map]; Strand: c
- AT1G21250.1 - [+] show detail - cell wall-associated kinase
  Distance: 0; Region: exon3 (CDS)

GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTATTATTGA 
CGGCCAAGTG ATGAACGAGG ATAATCTGAG GGAGATCCAG GAAGCTGCAA 
GAATTGCTGC AGAGTGTACA AGGCTAACGG GAGAGGAAAG GCCAAAGATG 
AAACAAGTAG CTGCAGAGCT AGAAGCCTTG AGAGTCAAAA AAACCATACG 
TAAGTGGTCG GATCAGTACC CTGAAGAGAA CGAACACTTG ATTGGTGGTC 
ACATCTTGTC AGCACAAGGC GAAACCAGTA GCAGCATTGG CTATGACAGC 
ATCAAGAATG TAGCAATATT GGACATTGAA ACTGGCCGCT GATATTACAA 
ATTCACATGT ATTTCTTTTG TTTGTAAGAA AAAAAAAACA ACCCCTTGGT 
GGCTCAATAA AAAAGGCTTG GCTCCATTAA AAAGGATTGG AAAAAATTTT 
TTTAAATCAC CAAAAACCAG GTTGGGAATC CCCATGGG

5 prime edge [+] show sequence

Chromosome: 5; Position: 22478486 [Map]; Strand: w
- AT5G55480.1 - [+] show detail - SHV3-like 1
  Distance: 354; Region: intergenic
- AT5G55490.1 - [+] show detail - gamete expressed protein 1
  Distance: 226; Region: intergenic

CCTACTTTCT CCCTGGCTTA GCATGAAGCT CTTCAAGCAT GCTTGATATA 
TCCATCGATC ACCATTTTAA GGATCTATTG TGAGTTTCAA TTTCACTCTC 
TCTTGACAAT TCATTACTGT ATGTAACAGA AAAGCTATGG ATGTGGATTT 
CTTGATTAAA TTGAGACAAC TTTGTTATCA AAGTAGATTT GTTTAACTTT 
AGTGATTACT GCAAAATTAT GTTTGTTTTT TTTTGTAAAA TGAGTTATCA 
GTATATAGAT GAAGAGCTTG TATTACACGT AGTGACTTGT TACTCTCAAT 
TAAATCTTCC AAAGCATATG GTTACATTAT TGCAAAAACT ATAGCATATA 
ATTATAGTTT TGATCCAGAT ACAATGTGAA GTTTCCCTAA GATACATATA 
TGACTAATGT AGTTTCGACT TTGAGTGAAA AACTTTG

AT1G21250.1

Model type: Protein coding
Short Description: cell wall-associated kinase
Curator Summary: cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides.
Computational Description: cell wall-associated kinase (WAK1); FUNCTIONS IN: kinase activity; INVOLVED IN: cell surface receptor linked signaling pathway, response to virus, defense response to fungus, response to salicylic acid stimulus; LOCATED IN: plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: wall associated kinase 3 (TAIR:AT1G21240.1); Has 130372 Blast hits to 120319 proteins in 4569 species: Archae - 123; Bacteria - 13482; Metazoa - 56283; Fungi - 9380; Plants - 33196; Viruses - 438; Other Eukaryotes - 17470 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G55480.1

Model type: Protein coding
Short Description: SHV3-like 1
Curator Summary: Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development.
Computational Description: SHV3-like 1 (SVL1); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: trichome differentiation, cell wall pectin metabolic process, glycerol metabolic process, guard cell morphogenesis, plant-type cell wall cellulose metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterase family protein (TAIR:AT4G26690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G55490.1

Model type: Protein coding
Short Description: gamete expressed protein 1
Curator Summary: Encodes a transmembrane domain containing protein that is expressed in pollen germ cells.
Computational Description: gamete expressed protein 1 (GEX1); Has 7985 Blast hits to 6093 proteins in 809 species: Archae - 118; Bacteria - 1642; Metazoa - 3258; Fungi - 589; Plants - 254; Viruses - 18; Other Eukaryotes - 2106 (source: NCBI BLink).
Link: InterPro Scan - TAIR