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GT15019

CSHL Arabidopsis genetrap mutant lines

Original: GT15019

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15019

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7762823 [Map]; Strand: c
      • AT1G22030.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST...
        Distance: -2267; Region: intergenic
      • AT1G22040.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: -5101; Region: intergenic
    Flanking Genome Sequence: GT15019 - 5-prime edge 
    ACTTTCTCCC TGGATGATGA CTTGCAAACA TCACAGAGAC CTATGTCCTA 
    AAAAGAATTT TAAGTATGTG CATCGACCTA AAAGGATACA TACAAAGAAT 
    CTCATCATTT CCATTTATTC TTTTTTGGCA AATGTTGCAA ATTGTAGAAA 
    AAGGTGGCAT AGACGAAATA TGAATTGGGT AAATAAAAAT GACACTTATG 
    AAGTAGTAGT ATTAATCATT TTTCTTATTT TTATTTTCTT GGAGAAATTA 
    AAAACCCACG AAATCAGTAG CTCGAGGGAG GAAAAGAGGG AAGAAGCACC 
    TAAAAAAGTG AACACTAAAA ACTCAACATA TATAAATGAG AAGATAGAGA 
    CCCCACTCAA AACCCTAAAC ATTCAATAGG TCATTGTTTT TTATTTTAGC 
    TTTTAGCAAA GAAAAGGGAC CAAATGTACG TTATTAATTT ATTAGTATGG 
    TTTAGGTTGA TCGTTGGAAT ATCTCAATAT TTAATCTTTA CCATGTATAA 
    ATGTCAAAGT AAATTACCTT TTGAAAAGAT CTAAATGATT TTTTTACCCC 
    CGAAAAGACC TAAAGATCTT CTATTAGGCT CAACTATCTT TTCTTCAATG 
    CATAAATTTA GCAAGAAATC AAACTTTGTA AGCTATGTAA GTATTTTATA 
    TA

AT1G22030.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77855.1); Has 99 Blast hits to 99 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G22040.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G55270.1); Has 10813 Blast hits to 5578 proteins in 328 species: Archae - 18; Bacteria - 659; Metazoa - 8206; Fungi - 35; Plants - 1449; Viruses - 72; Other Eukaryotes - 374 (source: NCBI BLink).
Link
InterPro Scan - TAIR