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Mutant Lines
GT15131

GT15131

CSHL Arabidopsis genetrap mutant lines

Original: GT15131

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15131

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 8898248 [Map]; Strand: c
- AT5G25560.1 - [+] show detail - CHY-type/CTCHY-type/RING-type Zinc finger protein
  Distance: 0; Region: intron1 (5UTR)
- AT5G25560.2 - [+] show detail - CHY-type/CTCHY-type/RING-type Zinc finger protein
  Distance: 0; Region: intron1 (5UTR)
- AT5G25560.3 - [+] show detail - CHY-type/CTCHY-type/RING-type Zinc finger protein
  Distance: 0; Region: exon1 (5UTR)
- AT5G25560.4 - [+] show detail - CHY-type/CTCHY-type/RING-type Zinc finger protein
  Distance: 0; Region: exon1 (5UTR)

AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC TCTATTAGGA 
TACATATGAT GACTATGAAG CAGTCTTTGA GTGGCAGGGT TCTTAGGGGG 
GTCTTTGGTA TCTATCTGTA GGAGGGCTTT TAGGTGCTGT TTCGGGAGAT 
TAAAGCCAGA TTCAAGGTGA GTCTGAGAGC TTGGTTCTTG TATCTTCTTG 
TTTACCAATG GGAATCTAGG TCACTGAGAA ACCATCCTTC TTGTCGATCG 
ACTAGAAAAA ATCGATTATT TTTCTATCCC AAGTAGTTGC TTTTTCTTTC 
TTAACCATAA CTTGTGCAAT CTTCATTCTA CCTAAGCATT TCCCCTTGAT 
AATGAAACTC TTTAATCATC TCTGATTTGG CCAAGAGTGT TCTTTTTTTT 
TGCCATCTCA TCTAGGGNGG ATTAACAGAG GTTCCTCTTA GTTATTCTTC 
AAGAAGGCGG CATGAATGCT CACTTTGTTT GAAGCCTGCT TATCTCAGCT 
ATGGTCTCCA TAGTGAGTTT CCCTTAGAGC ATATCTCGTT GTTGTCCATG 
ATGAAGTTTT TGC

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 8898117 [Map]; Strand: c
  - AT5G25560.1 - [+] show detail - CHY-type/CTCHY-type/RING-type Zinc finger protein
    Distance: 0; Region: intron1 (5UTR)
  - AT5G25560.2 - [+] show detail - CHY-type/CTCHY-type/RING-type Zinc finger protein
    Distance: 0; Region: intron1 (5UTR)
  - AT5G25560.3 - [+] show detail - CHY-type/CTCHY-type/RING-type Zinc finger protein
    Distance: 0; Region: exon1 (5UTR)
  - AT5G25560.4 - [+] show detail - CHY-type/CTCHY-type/RING-type Zinc finger protein
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: GT15131 - 5-prime edge
```
TCTGAAATCT TCCAAAAAAT TTCAATTAAC TATACATAAA CCTAATCGAT 
CAAAGTAAAG TGTACGAACA AAAATCAACC ACACATTCAG AAACACAGAC 
ATTACCAAGA AAAAAAAACC CCAAAGGATT TAAATCACGG AAACGTAAAC 
GAGAAGATAA ACGAACTTTC GATCCGACGA TTCTTCACCG ATCAGAATTT 
TCAGAGAGAG AGACGATAAA TTCTCCGACG ATAATTCTCG CTCGCTCCGA 
AGCAACAAGA TGAAACTGAC GACGAATAAA ATGAAAGTTT TTTTTTTCTC 
TTGCGGGGGG GGGGATTTTT TTAAGTAAAA AAAAAGGGGG GGGGGTTTCT 
AATAAAGGAA GGAAAGGTTT CCCCAAACTC CAAATTTGGA TGGTTCCTTG 
GGGTAAAAA
```

AT5G25560.1

Model type: Protein coding
Short Description: CHY-type/CTCHY-type/RING-type Zinc finger protein
Computational Description: CHY-type/CTCHY-type/RING-type Zinc finger protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: CHY-type/CTCHY-type/RING-type Zinc finger protein (TAIR:AT5G22920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G25560.2

Model type: Protein coding
Short Description: CHY-type/CTCHY-type/RING-type Zinc finger protein
Computational Description: CHY-type/CTCHY-type/RING-type Zinc finger protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: CHY-type/CTCHY-type/RING-type Zinc finger protein (TAIR:AT5G22920.1); Has 943 Blast hits to 942 proteins in 169 species: Archae - 2; Bacteria - 0; Metazoa - 357; Fungi - 128; Plants - 310; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G25560.3

Model type: Protein coding
Short Description: CHY-type/CTCHY-type/RING-type Zinc finger protein
Computational Description: CHY-type/CTCHY-type/RING-type Zinc finger protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: CHY-type/CTCHY-type/RING-type Zinc finger protein (TAIR:AT5G22920.1).
Link: InterPro Scan - TAIR

AT5G25560.4

Model type: Protein coding
Short Description: CHY-type/CTCHY-type/RING-type Zinc finger protein
Computational Description: CHY-type/CTCHY-type/RING-type Zinc finger protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: CHY-type/CTCHY-type/RING-type Zinc finger protein (TAIR:AT5G22920.1).
Link: InterPro Scan - TAIR