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GT15133

CSHL Arabidopsis genetrap mutant lines

Original: GT15133

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15133

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2870072 [Map]; Strand: c
      • AT3G09340.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: exon2 (CDS)
      • AT3G09350.1 - [+] show detail - Fes1A
        Distance: -973; Region: promoter
      • AT3G09350.2 - [+] show detail - Fes1A
        Distance: -973; Region: promoter
      • AT3G09350.3 - [+] show detail - Fes1A
        Distance: -973; Region: promoter
    Flanking Genome Sequence: GT15133 - 3-prime edge 
    CGGTAGAGGT TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGGTGTT 
    GGATAACCCG ACCTGAGATG AAAGGAATGA TACATCGTCT TTCTCAGAGA 
    GCAGCGGTTG TTTGCTTGTG GAAGACACAA ACGAATTTGC AATAGAGGTT 
    GGACGTCTCT TGTATAAGGA AGCGATGGAG CTACTGAATG ATGTCTCAGT 
    ACTTCTCCCT TGTATGAAAC TGACCATAGG AGGTGTAACT CCGGTCAAGA 
    GATCCACAGA GTGTCTGAAT TTTACATGAA AAAAAGAAGG AAGAATCTTC 
    ACAAACACTT CAAATAATTT CGTTAGATAT CGAAAAACAA AGTATTTTAT 
    TTTACCTATA ACTCTGAGGC CAGAAAGCGG AATCATTCTG GGATAATGAA 
    AAAGATGCAT TGGAATCATC GTCGTCATTA ACATATGAGA CATCGACATG 
    GCAGTCATCG TCATCTGTCT GAATCAATAT GTCCCTTTCT TGCTCCTCAA 
    GATCCATCTT CGTCGTCTCT GCTTCAAAAC AGAGTTAAAT CAGAGCAAGT 
    AACAGATTCC AGGACAGAAC AAACGAAACA GGAAAAAAAG GAGGGAACAG 
    AGAAGTGAAA TGAATATTGG AAGAAATATA AAGAGACGAC GAAGAGACTC 
    GGTATTGAGT TCGATGTGTT GTCACGTCTG ACGTCTGTCA ACTTTGTATT 
    AGTCTTAGGA AAAAAACACT TTGTATTAGT CCATTGATAC TACTTGATCA 
    TATGTAACGA ATTAAATTCT GGTCGACTGG TCGTTAAATT T

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2870014 [Map]; Strand: c
      • AT3G09340.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT15133 - 5-prime edge 
    CCTACTTTCT CCCTGCCACA CCGATCTCTC GTATGGAGAA CCAAATTTTT 
    GCTCGTTTCC CCAATCTGTT CTAAATGGTA AGACGTAGTA GTATCGATAT 
    TGATTTTGTC TCAAAAGTCT TTAGGGTTTG GGCATTCGGT TCGGTTGAAC 
    AGAGATTTTA TCGTCATAAC AAAAAGAAAA GTTTCAATCT CTCTTTAAGT 
    TGAACCTATT TTTGGTGAAG GAATCAATGT CCTTTGTGGA ATAAGTCTAC 
    TCACAATGCC TTACGCGGTG AAAGAAGGAG GATGGCTCGG GCTTTGTATA 
    CTCTTATCCT TTGCTATCAT CACTTGCTAC ACTGGTATCC TCCTCAAACG 
    ATGTCTTGAG AGCTCTTCTG ATCTCCGTAC CTACCCGGAC ATTGGTCAAG 
    CTGCCTTTGG ATTTACAGGC CGCCTCATCA TCTCCGTGAG TTATATGGAA 
    ATGATTTACA TATATACTTC ACATATCTCC AAACTAATAT TTAGGGTTCT 
    TGATCTCTGC TGAGAGTTGC AGATACTTCT GTACATGGAG TTATACGTAT 
    GTTGTGTGGA GTATATAATC ATGATGAGCG ATAATTTATC GAGAGTTTTC 
    CCCAACATTA CATTAAACAT CGTTGGAGTA TCTCTAGATT CTTCTCAGAT 
    CTTTGCTATA TCAGCTACTC TTATTGTTCT TCCTACAGTT TGGCTCAAAG 
    ACCTTAGCTT ACTCTCCTAT CTCTCAGGTT CCATTTTCT

AT3G09340.1

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Computational Description
Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G09330.1); Has 5037 Blast hits to 4989 proteins in 303 species: Archae - 8; Bacteria - 84; Metazoa - 1819; Fungi - 980; Plants - 1422; Viruses - 9; Other Eukaryotes - 715 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09350.1

Model type
Protein coding
Short Description
Fes1A
Curator Summary
Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro.
Computational Description
Fes1A (Fes1A); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1C (TAIR:AT5G02150.1); Has 622 Blast hits to 617 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 202; Fungi - 158; Plants - 182; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09350.2

Model type
Protein coding
Short Description
Fes1A
Curator Summary
Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro.
Computational Description
Fes1A (Fes1A); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1B (TAIR:AT3G53800.1); Has 594 Blast hits to 590 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 149; Plants - 182; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09350.3

Model type
Protein coding
Short Description
Fes1A
Curator Summary
Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro.
Computational Description
Fes1A (Fes1A); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1B (TAIR:AT3G53800.1); Has 594 Blast hits to 590 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 149; Plants - 182; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
Link
InterPro Scan - TAIR