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Mutant Lines
GT15143

GT15143

CSHL Arabidopsis genetrap mutant lines

Original: GT15143

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15143

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 6545931 [Map]; Strand: c
  - AT3G18970.1 - [+] show detail - mitochondrial editing factor 20
    Distance: -499; Region: promoter
  - AT3G18980.1 - [+] show detail - EIN2 targeting protein1
    Distance: -532; Region: promoter
  - AT3G18980.2 - [+] show detail - EIN2 targeting protein1
    Distance: -565; Region: promoter
Flanking Genome Sequence: GT15143 - 3-prime edge
```
AAACGGTAGA GGTTTTTACC GACCGTTACC GACCGTTTTC ATCCCTACCT 
CAGATTATAC AAAAGCAAAA AAAACACTAG AGATTCTTTC GCTGACAATC 
CATACGCTTT TTAAACTATT GATCCCTCCA GAACTGTATC CGATATTCAC 
AGATTTTGCC TTGATTTTGG AAGGCGGAGG AGGATAGACC GGTACGGATG 
TCGGTGAAAA AAACTTGGAA TCGTTATCGT GTTGGCCAGG TGGTTTTTTT 
TTTTTTCCCC CCCCCAATTT TGGGGGGGCC CCCCTTTTTT AAAGAGAAAA 
AAAAAGGCTT AACCCCCCCC CGAAA
```

5 prime edge [+] show sequence

Chromosome: 3; Position: 6545878 [Map]; Strand: c
- AT3G18970.1 - [+] show detail - mitochondrial editing factor 20
  Distance: -446; Region: promoter
- AT3G18980.1 - [+] show detail - EIN2 targeting protein1
  Distance: -585; Region: promoter
- AT3G18980.2 - [+] show detail - EIN2 targeting protein1
  Distance: -618; Region: promoter

TCCTACTTTC TCCCTGATCT GAGGTGGGTT CGTTGAGATT ATCTGATCAA 
ATGATATAGA GAGAGCTGTA TGTTTCTGTT CTATGTTGTT AGAATTTTGT 
TCATAATTTT CGGATTAGCT TTTGAGGTTG ATCAATGAAG CAGTAGACAT 
CGCATAGGCG ACACCATAGT CCATGTAATT TTTGAAATTA GCAAATTAGA 
TGTTTTATCA TCTGTCTCAA ACTACCTTGA GGTAAAGATT TCTCAAATAC 
GGGAGATTTG TTATAGGAAA ACAGAGATGC GCAATGAATG ACATGGGCAA 
AAGTGGAGTG GAGTGGAGGA ATATAAGGGA CACGTGACAG AAGCTTATTG 
GAGTGTTTGT CTAGTATGAC AAGTGTTTGT TGTGATGATG CGCTTGAGGA 
TATGATAATT TGTTGAAGAC TGAATCCAGT GGTAGTAGCT AGCTCTCACT 
AGAAAGGGAT TTACAGTGTA GGAGTATCTT AATTTAAAAA CAACTAAAAA 
AACTCTCTTC TGGTCTGTGT CGTTATTGCG TCAGTGTCTC GTTTTTTCTC 
TCGGGTTTAC TTTGTGTTAT CGATGTGGAT AAGTTGTTTT TACCTCATTA 
TATATAACCT CTTGAGTGGA ACTCAAATTG TTTGAGTAGA ACAAACAAAG 
TTAGGGTTTA AGAAGAAGTC TGTAAATACC TAATCTCCAT CAAATTTGGT 
ACTTGTAGCC CTGATGATGA TTATGATGAA GATGGGTTTG TGCT

AT3G18970.1

Model type: Protein coding
Short Description: mitochondrial editing factor 20
Curator Summary: Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing.
Computational Description: mitochondrial editing factor 20 (MEF20); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G59200.1); Has 30354 Blast hits to 12990 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 18; Plants - 30011; Viruses - 0; Other Eukaryotes - 317 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G18980.1

Model type: Protein coding
Short Description: EIN2 targeting protein1
Computational Description: EIN2 targeting protein1 (ETP1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: EIN2 targeting protein2 (TAIR:AT3G18910.1); Has 1009 Blast hits to 963 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1009; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G18980.2

Model type: Protein coding
Short Description: EIN2 targeting protein1
Computational Description: EIN2 targeting protein1 (ETP1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: EIN2 targeting protein2 (TAIR:AT3G18910.1); Has 1009 Blast hits to 963 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1009; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR