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GT15165

CSHL Arabidopsis genetrap mutant lines

Original: GT15165

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15165

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 425941 [Map]; Strand: c
      • AT5G02150.1 - [+] show detail - Fes1C
        Distance: 0; Region: intron1 (CDS)
      • AT5G02150.2 - [+] show detail - Fes1C
        Distance: 0; Region: intron1 (5UTR)
      • AT5G02160.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -285; Region: promoter
    Flanking Genome Sequence: GT15165 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTACC 
    ACTAAGTGAC CAACAAAACC TGAAATTACA AAGAAACTTC GTACCTTAAT 
    TGGCGAGTAG GTCGAGTACC ATCGGAGTGA GAGAGACTCC ACTTAAGCAG 
    ACCGTCCCAG TTAGGTCCGT CTTTCGCCAT TGAAGCAACG GAAGAAGAGA 
    AAGACTCTGC GAAGGTCAGA GAGTCAGAGA CAATGACAAA TAGTTTGGGC 
    CTTATGTTCA CGCTAACTTA ATAATGGGCT TAACAGGCCC AATTGTTAAC 
    TCGAAATATC TTGAAGGGGC CTACCTTATC CACACACAAA AGAAAACTGA 
    AGAACCCCAA AAATCCCAAG TGAAAACGTT ATCCACTTCG AGAGAGTGAC 
    ACGTCACGAA GCAAATCCAA ATTCAAAACC TTTCCATAAA AATCAAATCA 
    CTTCTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 425884 [Map]; Strand: c
      • AT5G02150.1 - [+] show detail - Fes1C
        Distance: 0; Region: intron1 (CDS)
      • AT5G02150.2 - [+] show detail - Fes1C
        Distance: 0; Region: intron1 (5UTR)
      • AT5G02160.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -342; Region: promoter
    Flanking Genome Sequence: GT15165 - 5-prime edge 
    CTTTCTCCCT GCTTAGTGGA GCTTATGTTG TTTGTTGGGT TGTTTTAGAA 
    ATTTGCGTGG TTCTGCGTCA GTTTCTTATG AGGAATGAAT CATGTAGTGG 
    AATTTGACTA TTTGATTTGG TATTTTTTGG TAGATGGTTT TTGATGATAT 
    GAAATTGTTT GGTTAGACAG TGAGGAGGAT CGAAAATGGT TTGCAGAAGC 
    TATGCAATCA CAAACGGTAG ATGTAGTCAA GCGGTTGAAG GAGATTACAC 
    AGGTATTGCA GACACCTCAA CAAGTTTTGG AGGCTCATGA AGTGACCCCT 
    CAAGATATTG AAGGTTCAAT ATGGAGTTCA CTATTGTTTT CTTAGCTATT 
    TTCTCTCTTG TTGGTTACTA AGATTTTGAG TTATGATGAT TTGGTAGGTT 
    TGTTGGATGA GTTGCAGGAA CATGTTGAAT CGATTGATAT GGCTAATGGT 
    GAGTCTTTTC ATACTTTGAC CTTGTAACTT TGTTCTATAT CTGTCTTTTG 
    ATTGCTGGGC TTAACTTGTA CTTCTTTGAA TGTATGGGCA GATCTTCATT 
    CCGTTGGAGG CTTGGTACCT CTTTCTTGGC TACCTCAAAA ACTCCAATGC 
    TAATATCCGG GCTAAGTCTT CAGATGTTGT A

AT5G02150.1

Model type
Protein coding
Short Description
Fes1C
Curator Summary
Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150).
Computational Description
Fes1C (Fes1C); FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1A (TAIR:AT3G09350.1); Has 582 Blast hits to 579 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 149; Plants - 170; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G02150.2

Model type
Protein coding
Short Description
Fes1C
Curator Summary
Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150).
Computational Description
Fes1C (Fes1C); FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1A (TAIR:AT3G09350.3); Has 563 Blast hits to 561 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 185; Fungi - 152; Plants - 168; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G02160.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR