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Mutant Lines
GT15166

GT15166

CSHL Arabidopsis genetrap mutant lines

Original: GT15166

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15166

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 26141441 [Map]; Strand: w
- AT1G69530.1 - [+] show detail - expansin A1
  Distance: -395; Region: promoter
- AT1G69530.2 - [+] show detail - expansin A1
  Distance: -395; Region: promoter
- AT1G69530.3 - [+] show detail - expansin A1
  Distance: -395; Region: promoter
- AT1G69530.4 - [+] show detail - expansin A1
  Distance: -395; Region: promoter
- AT1G69530.5 - [+] show detail - expansin A1
  Distance: -395; Region: promoter

AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAATC 
AGAAGCAACC AGACCCAAAT GACATCTTCT CCACGTCATG GTTTGATGGA 
CTCTGTACAT AGTAAAGAGG TCTAATCGCT GAACGCGGCG GAGACAAAGC 
CGCTGCGTCG ATGCTTGTTG CCTCCGAGTC TGTCTTCGCA TGCATGNTCT 
CTTGACTATT TCTCCTTTGT TTTAAGACGA GTAATGGAAG AGGAAGCAGA 
AGCAGCAATA AAACAGAGAT GGTAGCTCCT AGTGGCGTGT TTGGTTCATT 
TTCACTCGAC CAANNNNTNN NTTTGTCGTT CGTTTATCTC AATCTAATGT 
TTCGATGCGT AACCATCTTA TTATTTATTT TAAAATCAGC AAACCTATGT 
ACGATCGATG AAGAAGTCGT GTCTGGTTTA TGAGAAAAAA TGTCGCTGGA 
AGTACATATA TTGAATTACT TAATGACAAA ATAAAAATTT TACATGTGTT 
TGGTGATGAA GTATCTAACT TTTAAGGAGC TTCTACGGTG TTTCTGCAAA 
TGTATTTATT AGAGTTAGAT AGATTTTTTA GAGTCACATT TTTTT

AT1G69530.1

Model type: Protein coding
Short Description: expansin A1
Curator Summary: Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.
Computational Description: expansin A1 (EXPA1); CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A15 (TAIR:AT2G03090.1); Has 2218 Blast hits to 2214 proteins in 171 species: Archae - 0; Bacteria - 17; Metazoa - 0; Fungi - 48; Plants - 2114; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G69530.2

Model type: Protein coding
Short Description: expansin A1
Curator Summary: Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.
Computational Description: expansin A1 (EXPA1); CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Barwin-related endoglucanase (InterPro:IPR009009), Rare lipoprotein A (InterPro:IPR005132), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A15 (TAIR:AT2G03090.1); Has 2218 Blast hits to 2214 proteins in 171 species: Archae - 0; Bacteria - 17; Metazoa - 0; Fungi - 48; Plants - 2114; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G69530.3

Model type: Protein coding
Short Description: expansin A1
Curator Summary: Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.
Computational Description: expansin A1 (EXPA1); CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A15 (TAIR:AT2G03090.1); Has 2216 Blast hits to 2212 proteins in 170 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 48; Plants - 2114; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G69530.4

Model type: Protein coding
Short Description: expansin A1
Curator Summary: Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.
Computational Description: expansin A1 (EXPA1); CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A15 (TAIR:AT2G03090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G69530.5

Model type: Protein coding
Short Description: expansin A1
Curator Summary: Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.
Computational Description: expansin A1 (EXPA1); CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A15 (TAIR:AT2G03090.1).
Link: InterPro Scan - TAIR