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GT15240

CSHL Arabidopsis genetrap mutant lines

Original: GT15240

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15240

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24098669 [Map]; Strand: w
      • AT5G59810.1 - [+] show detail - Subtilase family protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT15240 - 3-prime edge 
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGTT 
    CCCGGAGCCA ATGTGTTTGG TATCGGGAAT GGAACAGCCA GTGGCGGTTC 
    TCCTAAAGCT AGAGTCGCGG CTTACAAGGT GTGCTGGCCC CCTGTGGATG 
    GCGCGGAGTG CTTTGATGCT GATATTTTGG CAGCGATTGA GGCTGCCATC 
    GAAGACGGCG TGGATGTTCT CTCGGCTTCA GTGGGAGGAG ATGCTGGAGA 
    TTACATGAGC GATGGTATAG CCATTGGATC CTTCCACGCC GTCAAAAACG 
    GGGTGACGGT TGTGTGCTCT GCTGGAAATT CAGGTCCTAA GTCTGGCACT 
    GTCTCAAACG TTGCACCATG GGTTATTACA GTCGGTGCTA GCTCCATGGA 
    TCGGGAGTTT CAAGCTTTTG TTGAGCTCAA AAACGGCCAA AGCTTCAAGG 
    TTTGATACTT TGACCTCGTC TTCTTTTTTT TTCCTTCCCC TTTGGGTCCC 
    TTCCTGGCTG GGGCTCCAGG AAATAAATTT GAAAAAGAGG GAACAAGCCT 
    CTTCAAACCC TTTGCCGAAA AAAAAAAGGA TAACCCCCTC CAGGGTTCCA 
    AAGCCTATGG AACCCAAGGA AA

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24098727 [Map]; Strand: w
      • AT5G59810.1 - [+] show detail - Subtilase family protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT15240 - 5-prime edge 
    CTTTCTCCCT GCCGGGAACA AGTTACCAGC CGCGGTGGAA AGAGTGTGGC 
    TACCGTGACC ATCGTGGTCA CGACAGGTTT CATAGGAGGC GTTAGAAGGA 
    AGGCCTGTGT AAGCTAAGTA ACCTTTGTTG AAGTATCTAG CACCGATGAG 
    CTTCCTGGTT ACATGTAACG AATCAATAAT CACATTCTCT GTATATTTCT 
    ATATTTGCAG AAAGAAGTCA ACTAAATTAA GATGAGAACC TGTTGCAAGG 
    AACATCCTTG TGGCATCTAC CTTTCCACCT AGCTGGAACA GCTCCATACC 
    CTT

AT5G59810.1

Model type
Protein coding
Short Description
Subtilase family protein
Computational Description
SBT5.4; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT2G04160.1); Has 6522 Blast hits to 5856 proteins in 960 species: Archae - 194; Bacteria - 3635; Metazoa - 89; Fungi - 206; Plants - 1959; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink).
Link
InterPro Scan - TAIR