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Mutant Lines
GT15260

GT15260

CSHL Arabidopsis genetrap mutant lines

Original: GT15260

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15260

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 1; Position: 22372706 [Map]; Strand: c
- AT1G60780.1 - [+] show detail - Clathrin adaptor complexes medium subunit family protein
  Distance: -547; Region: promoter

GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCACAT TTGATCATTC 
TCCATTATAG TATTCTAGTT CGCTATATAA AATTTCAATA GAACACTGCA 
ACATGAATTG TTTTGTAACA TGAAATTGTG AATTTGTGAT GTTACCGGTG 
TGAGTGCATT CGTTGTTGGA TTGATTAGTA CGATTGCATA CTTTGTGTGA 
TTGATTGGTA CACAATGGAA GCGTAATTGA AAGTAATAGA TTTCAAACCT 
TTCTAAACCA TGTAGTTAAC TTGAAGCTTA TTCAAGTAGT TTATTACTTT 
CAAACTTGAT ATTTTGTTAC ATAGCTAGTT TGGCTCTTAA GTTCTCACCA 
AAGATTATGG GATCTTAATG CAGATATATA CCCCCTTATA TATCCACATG 
TTATGAGTAT TTCTCAATTT TTTGGCTTTA TTGGATGACT ATTTTATCTG 
TTTTCTGTGA CTATCTTAGT CTTTTATAAA TACTATATAT ATGCATCTTC 
TTGTTCTGTA ATTCATAGGG CAATGGTAAT TCAATACTCG GAGCTTAACT 
AATATAGGAT CGCCTTA

5 prime edge [+] show sequence

Chromosome: 5; Position: 23306269 [Map]; Strand: c
- AT5G57550.1 - [+] show detail - xyloglucan endotransglucosylase/hydrolase 25
  Distance: 0; Region: exon1 (CDS)

CGTCTCGACT ACGACCCTCT TCTCTCCGGT TTTCGCAGGA ACGTTCGACA 
CAGAATTCGA TATCACTTGG GGTGATGGTC GTGGCAAGGT TCTTAACAAC 
GGAGAGCTTC TCACTCTCTC CCTCGACAGA GCCTCCGGCT CTGGTTTTCA 
AACCAAGAAA GAGTATTTGT TCGGGAAAAT CGACATGCAG CTCAAACTCG 
TCCCTGGAAA CTCCGGCGGA GCCGTCACTG CCTACTACGT TAGTGTTACT 
T

AT1G60780.1

Model type: Protein coding
Short Description: Clathrin adaptor complexes medium subunit family protein
Computational Description: HAPLESS 13 (HAP13); INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G10730.1); Has 2206 Blast hits to 2139 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 1107; Fungi - 506; Plants - 213; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G57550.1

Model type: Protein coding
Short Description: xyloglucan endotransglucosylase/hydrolase 25
Curator Summary: xyloglucan endotransglycosylase-related protein (XTR3)
Computational Description: xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR