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GT15266

CSHL Arabidopsis genetrap mutant lines

Original: GT15266

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15266

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 412343 [Map]; Strand: w
      • AT4G00955.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15266 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    ACACCACATA TTCCGTTACA AGTTTCGGTC AAATTAGCCG CGGCAGAAGA 
    AACTCGTAGG TCGTTAAAAG ATCCTCCGAT CAAGATTATG ATCAAAACCA 
    AATTTAACTT ATAAGAAATC ATCACCATCT TCGTTGAACG TTGATTGAAT 
    CGATCTCAAC ATTCATCACC TTCCTGTAAA CATAAGAAAC TCAGAAAACT 
    ACTCACCTTC ATCCTCACTC GA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 412396 [Map]; Strand: w
      • AT4G00955.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15266 - 5-prime edge 
    ACTTTCTCCC TGATGTGGTG GATTGACTCT GTCTTATCCC TTTGGGTTTT 
    CTCTTGGTTG TCCGATCCAA TTCAATTGCT CTGCTGCGGG CCAAGGGGCG 
    AAGATCGGAG AGTTTCCCGT CCAAAACGTG ACGGAAAACA GTATATTGGT 
    CGGCGTTCCA ACCAATTGTA CTCGGAAGAT TGAAGACATG ACTCCGCTTT 
    TCGGCAAGCA GTTCACACCA TCGTCGGAGA ACAGTTTCTT TTTTTTTTTT 
    TTTTTTTTTT TTTTNNAAAA AACCCCCCTT TTTTTTAAAA AAAAAAAATT 
    TTTAAAAAGG GGCCCCCCGG GGGGAAAAAA ACCCCCCCCC CCCCAAAAAA 
    AATTTTTTCT TTTTTCCCCC AAATTTTTTG GGAAAAACCC CCCCCCCCCC 
    CCCCAAAAAA AAAAACCCGG GGGGGTTTTT TTTCCCCCCC CAAAAAAAAA 
    ATT

AT4G00955.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G23450.1); Has 94 Blast hits to 88 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR