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Mutant Lines
GT15281

GT15281

CSHL Arabidopsis genetrap mutant lines

Original: GT15281

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15281

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 23004500 [Map]; Strand: w
  - AT3G62120.1 - [+] show detail - Class II aaRS and biotin synthetases superfamily protein
    Distance: -179; Region: promoter
  - AT3G62120.2 - [+] show detail - Class II aaRS and biotin synthetases superfamily protein
    Distance: -208; Region: promoter
  - AT3G62130.1 - [+] show detail - Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
    Distance: -431; Region: promoter
Flanking Genome Sequence: GT15281 - 3-prime edge
```
AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGTT 
CGACTGCGAA ACTGGATTAG AATATAAATC CATCTTTTCT CCACAACTAT 
AGTATAAATA ATTAATGCAT CGATCGTTGA CTTATTGGGC TTGGCCCATG 
TAAACTAAGC ATTTAGGAAA AAACCAGATC CAACCCTAAC ACGTGGCCGT 
ATATAATTGG AAGTTCAGTA ACAAAGCTCG TCAAGCGAGT CAAACGTTCG 
CAACTTGTAA CGCTATTTTG CTCTCTCGAT TCCTTTCTCT CTTCTCTTAT 
CTTTGCTGCT TCTTTTGCTC CGCCGTCT
```

5 prime edge [+] show sequence

Chromosome: 4; Position: 760463 [Map]; Strand: c
- AT4G01760.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
  Distance: 0; Region: exon1 (CDS)

CAACCACCAG ACTACTCTGA TGGAAAATGT CGTCTTTGCG GTATGAAAGA 
TTGATGATAA ATTGTTTTAT CACTGCTCTT CATGTCACTC GACCATGGAT 
ATGCGTTGTG TTTTAAATCC ACCACCAAAA TCTGTTTTGG ATTTGAAAAC 
TCATGATCAT CAACTCAATC TTCTCCCAAG GCTCATTTTT TTTACATGTA 
ATGCTTGCGG GCTGAATGGA GAATCGAAGC CCTTACGCAT GTTTTCAATG 
TGATTTCTTG ATCCACAAAG ATTGTTTTGG TCTTCCACGC CTCATTAACA 
TCAATCGGCA TGATCATCGT ATTTCTAGAA CTTCTCTTAT TGGTATTGTG 
AATTCTGTAT GTGGAGTTTG TCGCCAGAAG GTGGACTGGA CTTGTGGGGG 
TTATTCAT

AT3G62120.1

Model type: Protein coding
Short Description: Class II aaRS and biotin synthetases superfamily protein
Computational Description: Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: prolyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G52520.1); Has 9240 Blast hits to 8990 proteins in 2633 species: Archae - 270; Bacteria - 6522; Metazoa - 295; Fungi - 194; Plants - 105; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G62120.2

Model type: Protein coding
Short Description: Class II aaRS and biotin synthetases superfamily protein
Computational Description: Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: prolyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G52520.1); Has 9240 Blast hits to 8990 proteins in 2633 species: Archae - 270; Bacteria - 6522; Metazoa - 295; Fungi - 194; Plants - 105; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G62130.1

Model type: Protein coding
Short Description: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Computational Description: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT5G26600.1); Has 4302 Blast hits to 4302 proteins in 1284 species: Archae - 105; Bacteria - 2583; Metazoa - 32; Fungi - 216; Plants - 120; Viruses - 0; Other Eukaryotes - 1246 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01760.1

Model type: Protein coding
Short Description: Cysteine/Histidine-rich C1 domain family protein
Computational Description: Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01910.1); Has 1878 Blast hits to 651 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 0; Plants - 1845; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link: InterPro Scan - TAIR