Home
Mutant Lines
GT15283

GT15283

CSHL Arabidopsis genetrap mutant lines

Original: GT15283

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15283

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 23004504 [Map]; Strand: w
  - AT3G62120.1 - [+] show detail - Class II aaRS and biotin synthetases superfamily protein
    Distance: -183; Region: promoter
  - AT3G62120.2 - [+] show detail - Class II aaRS and biotin synthetases superfamily protein
    Distance: -212; Region: promoter
  - AT3G62130.1 - [+] show detail - Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
    Distance: -427; Region: promoter
Flanking Genome Sequence: GT15283 - 3-prime edge
```
ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
AGTTCGACTG CGAAACTGGA TTAGAATATA AATCCATCTT TTCTCCACAA 
CTATAGTATA AATAATTAAT GCATCGATCG TTGACTTATT GGGCTTGGCC 
CATGTAAACT AAGCATTTAG GCAAAAACCA GATCCAACCC TAACACGTGG 
CCGTATATAA TTGGAAGTTC AGTAACAAAG CTCGTCAAGC GAGTCAAACG 
TTCGCAACTT GTAACGCTAT TTTGCTCTCT CGATTCCTTT CTCTCTTCTC 
TTATCTTTGC TGCTTCTTTT GCTCCGCCGT CTT
```
5 prime edge [+] show sequence
1. Chromosome: 3; Position: 23004596 [Map]; Strand: w
  - AT3G62120.1 - [+] show detail - Class II aaRS and biotin synthetases superfamily protein
    Distance: -275; Region: promoter
  - AT3G62120.2 - [+] show detail - Class II aaRS and biotin synthetases superfamily protein
    Distance: -304; Region: promoter
  - AT3G62130.1 - [+] show detail - Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
    Distance: -335; Region: promoter
Flanking Genome Sequence: GT15283 - 5-prime edge
```
GGTTAGGTCA TGGAATACCA AAGCTGTATT TTATTACTCA TGAGTAAAAT 
CACTCCTCAC ATGTCATTAT AACTCGGCCT AGTAACAGCC CACCTTAATG
```

AT3G62120.1

Model type: Protein coding
Short Description: Class II aaRS and biotin synthetases superfamily protein
Computational Description: Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: prolyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G52520.1); Has 9240 Blast hits to 8990 proteins in 2633 species: Archae - 270; Bacteria - 6522; Metazoa - 295; Fungi - 194; Plants - 105; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G62120.2

Model type: Protein coding
Short Description: Class II aaRS and biotin synthetases superfamily protein
Computational Description: Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: prolyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G52520.1); Has 9240 Blast hits to 8990 proteins in 2633 species: Archae - 270; Bacteria - 6522; Metazoa - 295; Fungi - 194; Plants - 105; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G62130.1

Model type: Protein coding
Short Description: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Computational Description: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT5G26600.1); Has 4302 Blast hits to 4302 proteins in 1284 species: Archae - 105; Bacteria - 2583; Metazoa - 32; Fungi - 216; Plants - 120; Viruses - 0; Other Eukaryotes - 1246 (source: NCBI BLink).
Link: InterPro Scan - TAIR