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GT15323

CSHL Arabidopsis genetrap mutant lines

Original: GT15323

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15323

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1483798 [Map]; Strand: c
      • AT1G05140.1 - [+] show detail - Peptidase M50 family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15323 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAATCTAAA 
    CCTTGCTGTG ATCAATCTGT TGCCTTTACC GGCTCTCGAT GGTGGAACTT 
    TGGCTCTGAT CTTATTGGAA GCGGTTCGAG GCGGGAGGAA ATTACCGTTA 
    GAGGTGGAGC AAGGGATTAT GTCTTCTGGA ATCATGCTTG TATTATTTCT 
    CGGTTTATTT CTCATCGTAA AGGACACACT TAATCTTGAT TTCATCAAAG 
    AAATGTTGTA AGCTATTGAG GTATATAGAA GAAACAAAAA AGTATTTTGA 
    GAGTTATAAA ACCAGTGATA TATAAAATCA AATTCTAAAT TTGCAAACTG 
    AAATTGGTCT AAAACGCAAT TGCGTGATTT ACCAAAACAA CATTGTGCAG 
    TCTCATCAAT CATCATCATA CACTTAAACT GAAACTATGC ACACAAGTTA 
    AAAAGAAAGT GTTACAATTT TCAAATTAGA CACAAAGATT GGAGTAGACA 
    GACACTTGAC GAGTTAGTTT CTTTGTTCCT TTCTATCAAG TGGCAATCGC 
    TTTTTTATGA GATTGCATCG AGAAACATAC ACACTTAGCT TTCATGGCTT 
    CAGCTTCACT CTCATATTCT CGGAACTTGT ATTCCTCCTG TTTAAACGAA 
    GGAGGAACCT TCCCTTCACT GTAACACTGG TTACACAAAC TAAACC

AT1G05140.1

Model type
Protein coding
Short Description
Peptidase M50 family protein
Computational Description
Peptidase M50 family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase M50, putative membrane-associated zinc metallopeptidase (InterPro:IPR004387); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS SERIN PROTEASE (TAIR:AT2G32480.1); Has 10190 Blast hits to 7652 proteins in 2240 species: Archae - 41; Bacteria - 6892; Metazoa - 13; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 3168 (source: NCBI BLink).
Link
InterPro Scan - TAIR